Chlorine in PDB 4nw4: Crystal Structure of A Hypothetical Protein (EF0375) From Enterococcus Faecalis V583 at 1.85 A Resolution
Protein crystallography data
The structure of Crystal Structure of A Hypothetical Protein (EF0375) From Enterococcus Faecalis V583 at 1.85 A Resolution, PDB code: 4nw4
was solved by
Joint Center For Structural Genomics (Jcsg),
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
26.73 /
1.85
|
Space group
|
P 65
|
Cell size a, b, c (Å), α, β, γ (°)
|
61.379,
61.379,
160.389,
90.00,
90.00,
120.00
|
R / Rfree (%)
|
15 /
18.1
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of A Hypothetical Protein (EF0375) From Enterococcus Faecalis V583 at 1.85 A Resolution
(pdb code 4nw4). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the
Crystal Structure of A Hypothetical Protein (EF0375) From Enterococcus Faecalis V583 at 1.85 A Resolution, PDB code: 4nw4:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
Chlorine binding site 1 out
of 6 in 4nw4
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Chlorine Binding Sites List in 4nw4
Chlorine binding site 1 out
of 6 in the Crystal Structure of A Hypothetical Protein (EF0375) From Enterococcus Faecalis V583 at 1.85 A Resolution
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of A Hypothetical Protein (EF0375) From Enterococcus Faecalis V583 at 1.85 A Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl411
b:56.4
occ:1.00
|
N
|
A:SER195
|
3.5
|
28.4
|
1.0
|
NZ
|
A:LYS198
|
3.8
|
59.6
|
1.0
|
CD
|
A:LYS198
|
3.9
|
40.3
|
1.0
|
CA
|
A:LYS194
|
4.0
|
31.3
|
1.0
|
CB
|
A:SER195
|
4.0
|
24.2
|
1.0
|
C
|
A:LYS194
|
4.2
|
28.4
|
1.0
|
CA
|
A:SER195
|
4.4
|
25.2
|
1.0
|
CB
|
A:LYS194
|
4.4
|
31.3
|
1.0
|
CE
|
A:LYS198
|
4.5
|
52.4
|
1.0
|
O
|
A:ASN193
|
5.0
|
31.6
|
1.0
|
CG
|
A:LYS194
|
5.0
|
42.6
|
1.0
|
|
Chlorine binding site 2 out
of 6 in 4nw4
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Chlorine Binding Sites List in 4nw4
Chlorine binding site 2 out
of 6 in the Crystal Structure of A Hypothetical Protein (EF0375) From Enterococcus Faecalis V583 at 1.85 A Resolution
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of A Hypothetical Protein (EF0375) From Enterococcus Faecalis V583 at 1.85 A Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl412
b:32.6
occ:1.00
|
O
|
A:HOH632
|
2.6
|
31.8
|
1.0
|
OG1
|
A:THR113
|
2.9
|
21.6
|
1.0
|
O2
|
A:GOL408
|
3.0
|
38.0
|
1.0
|
NH1
|
A:ARG180
|
3.2
|
25.4
|
1.0
|
N
|
A:THR113
|
3.5
|
19.5
|
1.0
|
CA
|
A:GLY112
|
3.7
|
19.7
|
1.0
|
C
|
A:GLY112
|
3.8
|
20.4
|
1.0
|
CD
|
A:ARG128
|
3.8
|
27.1
|
1.0
|
CB
|
A:ALA277
|
3.9
|
22.1
|
1.0
|
CB
|
A:THR113
|
3.9
|
19.6
|
1.0
|
CB
|
A:ARG128
|
4.0
|
28.2
|
1.0
|
CZ
|
A:ARG180
|
4.2
|
21.8
|
1.0
|
C2
|
A:GOL408
|
4.2
|
57.7
|
1.0
|
CA
|
A:THR113
|
4.2
|
19.7
|
1.0
|
CG
|
A:ARG128
|
4.2
|
29.4
|
1.0
|
NH2
|
A:ARG180
|
4.3
|
20.7
|
1.0
|
NH1
|
A:ARG128
|
4.4
|
35.6
|
1.0
|
O
|
A:HOH624
|
4.4
|
37.2
|
1.0
|
O1
|
A:GOL408
|
4.5
|
29.6
|
1.0
|
C1
|
A:GOL408
|
4.5
|
38.6
|
1.0
|
O
|
A:GLY112
|
4.6
|
22.2
|
1.0
|
O
|
A:ILE126
|
4.6
|
20.6
|
1.0
|
NE
|
A:ARG128
|
4.6
|
31.5
|
1.0
|
O
|
A:HOH725
|
4.8
|
46.7
|
1.0
|
CZ
|
A:ARG128
|
4.9
|
32.6
|
1.0
|
CE1
|
A:PHE96
|
4.9
|
24.2
|
1.0
|
C3
|
A:GOL408
|
5.0
|
60.9
|
1.0
|
|
Chlorine binding site 3 out
of 6 in 4nw4
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Chlorine Binding Sites List in 4nw4
Chlorine binding site 3 out
of 6 in the Crystal Structure of A Hypothetical Protein (EF0375) From Enterococcus Faecalis V583 at 1.85 A Resolution
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of A Hypothetical Protein (EF0375) From Enterococcus Faecalis V583 at 1.85 A Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl413
b:37.4
occ:0.50
|
CL
|
A:CL413
|
0.0
|
37.4
|
0.5
|
CL
|
A:CL413
|
2.0
|
54.4
|
0.5
|
N
|
A:ASP217
|
3.2
|
25.4
|
1.0
|
O
|
A:HOH656
|
3.5
|
39.1
|
1.0
|
O
|
A:HOH715
|
3.6
|
36.9
|
1.0
|
CA
|
A:ASN216
|
3.6
|
26.1
|
1.0
|
C
|
A:ASN216
|
3.9
|
23.2
|
1.0
|
CB
|
A:ASP217
|
3.9
|
28.2
|
1.0
|
ND2
|
A:ASN216
|
4.0
|
27.6
|
1.0
|
CA
|
A:ASP217
|
4.2
|
27.7
|
1.0
|
CB
|
A:ASN216
|
4.2
|
27.0
|
1.0
|
O
|
A:GLY215
|
4.2
|
32.7
|
1.0
|
CG
|
A:ASN216
|
4.7
|
26.6
|
1.0
|
N
|
A:ASN216
|
4.7
|
26.8
|
1.0
|
C
|
A:GLY215
|
4.9
|
31.8
|
1.0
|
O
|
A:ASP217
|
5.0
|
27.6
|
1.0
|
|
Chlorine binding site 4 out
of 6 in 4nw4
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Chlorine Binding Sites List in 4nw4
Chlorine binding site 4 out
of 6 in the Crystal Structure of A Hypothetical Protein (EF0375) From Enterococcus Faecalis V583 at 1.85 A Resolution
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of A Hypothetical Protein (EF0375) From Enterococcus Faecalis V583 at 1.85 A Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl413
b:54.4
occ:0.50
|
CL
|
A:CL413
|
0.0
|
54.4
|
0.5
|
CL
|
A:CL413
|
2.0
|
37.4
|
0.5
|
O
|
A:HOH715
|
3.0
|
36.9
|
1.0
|
CB
|
A:ASP217
|
3.9
|
28.2
|
1.0
|
N
|
A:ASP217
|
4.2
|
25.4
|
1.0
|
CA
|
A:ASP217
|
4.7
|
27.7
|
1.0
|
OD2
|
A:ASP217
|
4.8
|
52.5
|
1.0
|
O
|
A:GLY215
|
4.8
|
32.7
|
1.0
|
CG
|
A:ASP217
|
4.9
|
31.8
|
1.0
|
|
Chlorine binding site 5 out
of 6 in 4nw4
Go back to
Chlorine Binding Sites List in 4nw4
Chlorine binding site 5 out
of 6 in the Crystal Structure of A Hypothetical Protein (EF0375) From Enterococcus Faecalis V583 at 1.85 A Resolution
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Crystal Structure of A Hypothetical Protein (EF0375) From Enterococcus Faecalis V583 at 1.85 A Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl414
b:34.6
occ:0.50
|
CL
|
A:CL414
|
0.0
|
34.6
|
0.5
|
CL
|
A:CL414
|
1.7
|
51.2
|
0.5
|
N
|
A:ASN285
|
2.9
|
21.1
|
1.0
|
ND2
|
A:ASN285
|
3.4
|
32.3
|
1.0
|
CG
|
A:ASN285
|
3.5
|
33.5
|
1.0
|
CB
|
A:ASN284
|
3.6
|
22.4
|
1.0
|
CB
|
A:ASN285
|
3.6
|
25.5
|
1.0
|
CA
|
A:ASN284
|
3.7
|
20.8
|
1.0
|
C
|
A:ASN284
|
3.8
|
21.2
|
1.0
|
CG2
|
A:VAL191
|
3.8
|
26.9
|
1.0
|
CA
|
A:ASN285
|
3.8
|
27.4
|
1.0
|
OD1
|
A:ASN285
|
4.0
|
29.5
|
1.0
|
O
|
A:HOH665
|
4.5
|
37.9
|
1.0
|
CG
|
A:ASN284
|
4.7
|
22.1
|
1.0
|
OD1
|
A:ASN284
|
4.9
|
20.8
|
1.0
|
O
|
A:ASN284
|
5.0
|
20.8
|
1.0
|
O
|
A:HOH667
|
5.0
|
44.8
|
1.0
|
|
Chlorine binding site 6 out
of 6 in 4nw4
Go back to
Chlorine Binding Sites List in 4nw4
Chlorine binding site 6 out
of 6 in the Crystal Structure of A Hypothetical Protein (EF0375) From Enterococcus Faecalis V583 at 1.85 A Resolution
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of Crystal Structure of A Hypothetical Protein (EF0375) From Enterococcus Faecalis V583 at 1.85 A Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl414
b:51.2
occ:0.50
|
CL
|
A:CL414
|
0.0
|
51.2
|
0.5
|
CL
|
A:CL414
|
1.7
|
34.6
|
0.5
|
O
|
A:HOH665
|
3.2
|
37.9
|
1.0
|
N
|
A:ASN285
|
3.7
|
21.1
|
1.0
|
CB
|
A:ASN284
|
4.0
|
22.4
|
1.0
|
CB
|
A:ASN285
|
4.0
|
25.5
|
1.0
|
ND2
|
A:ASN285
|
4.0
|
32.3
|
1.0
|
CG
|
A:ASN285
|
4.3
|
33.5
|
1.0
|
CA
|
A:ASN285
|
4.4
|
27.4
|
1.0
|
C
|
A:ASN284
|
4.6
|
21.2
|
1.0
|
CA
|
A:ASN284
|
4.7
|
20.8
|
1.0
|
OD1
|
A:ASN284
|
4.7
|
20.8
|
1.0
|
CG
|
A:ASN284
|
4.8
|
22.1
|
1.0
|
CG2
|
A:VAL191
|
4.9
|
26.9
|
1.0
|
|
Reference:
Joint Center For Structural Genomics (Jcsg),
Joint Center For Structural Genomics (Jcsg).
N/A N/A.
Page generated: Thu Jul 25 23:01:56 2024
|