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Chlorine in PDB 4ny7: Bond Length Analysis of the Pqqc Y175F Mutant Structure Shows Evidence For Bound Pqq in the Reduced Form

Enzymatic activity of Bond Length Analysis of the Pqqc Y175F Mutant Structure Shows Evidence For Bound Pqq in the Reduced Form

All present enzymatic activity of Bond Length Analysis of the Pqqc Y175F Mutant Structure Shows Evidence For Bound Pqq in the Reduced Form:
1.3.3.11;

Protein crystallography data

The structure of Bond Length Analysis of the Pqqc Y175F Mutant Structure Shows Evidence For Bound Pqq in the Reduced Form, PDB code: 4ny7 was solved by S.J.Fisher, S.Puehringer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 1.44
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 70.998, 116.020, 67.520, 90.00, 90.00, 90.00
R / Rfree (%) 12.5 / 18.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Bond Length Analysis of the Pqqc Y175F Mutant Structure Shows Evidence For Bound Pqq in the Reduced Form (pdb code 4ny7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Bond Length Analysis of the Pqqc Y175F Mutant Structure Shows Evidence For Bound Pqq in the Reduced Form, PDB code: 4ny7:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4ny7

Go back to Chlorine Binding Sites List in 4ny7
Chlorine binding site 1 out of 2 in the Bond Length Analysis of the Pqqc Y175F Mutant Structure Shows Evidence For Bound Pqq in the Reduced Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Bond Length Analysis of the Pqqc Y175F Mutant Structure Shows Evidence For Bound Pqq in the Reduced Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl304

b:13.3
occ:1.00
NE A:ARG179 3.1 12.5 1.0
NE2 A:HIS154 3.1 10.3 1.0
NH2 A:ARG179 3.4 15.6 1.0
C5 A:PQQ301 3.4 12.3 1.0
C6A A:PQQ301 3.4 9.4 1.0
CB A:ALA150 3.5 9.9 1.0
C4 A:PQQ301 3.6 12.2 1.0
CZ A:ARG179 3.6 10.6 1.0
CB A:ALA183 3.8 12.5 1.0
C9A A:PQQ301 3.8 9.3 1.0
N6 A:PQQ301 3.9 9.3 1.0
CB A:ARG179 3.9 11.0 1.0
CD2 A:HIS154 3.9 12.2 1.0
O5 A:PQQ301 3.9 13.0 1.0
C3A A:PQQ301 3.9 10.3 1.0
CG A:ARG179 4.0 10.3 1.0
C1A A:PQQ301 4.0 8.9 1.0
O4 A:PQQ301 4.2 15.7 1.0
CD A:ARG179 4.2 13.7 1.0
CE1 A:HIS154 4.3 12.5 1.0
OE2 A:GLU147 4.4 12.5 1.0
CG A:GLU147 4.5 10.8 1.0
C7 A:PQQ301 4.5 10.8 1.0
C9 A:PQQ301 4.6 8.8 1.0
CA A:ALA183 4.7 11.1 1.0
O A:ARG179 4.9 11.8 1.0
C3 A:PQQ301 4.9 9.3 1.0
CA A:ALA150 4.9 10.0 1.0
C8 A:PQQ301 4.9 8.7 1.0
NH1 A:ARG179 5.0 12.9 1.0
CA A:ARG179 5.0 10.9 1.0

Chlorine binding site 2 out of 2 in 4ny7

Go back to Chlorine Binding Sites List in 4ny7
Chlorine binding site 2 out of 2 in the Bond Length Analysis of the Pqqc Y175F Mutant Structure Shows Evidence For Bound Pqq in the Reduced Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Bond Length Analysis of the Pqqc Y175F Mutant Structure Shows Evidence For Bound Pqq in the Reduced Form within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl304

b:14.2
occ:1.00
NE2 B:HIS154 3.1 13.4 1.0
NE B:ARG179 3.1 14.1 1.0
NH2 B:ARG179 3.3 16.4 1.0
C6A B:PQQ301 3.4 10.7 1.0
C5 B:PQQ301 3.5 13.4 1.0
C4 B:PQQ301 3.6 12.7 1.0
CB B:ALA150 3.6 12.4 1.0
CZ B:ARG179 3.6 14.0 1.0
CB B:ALA183 3.6 15.8 1.0
C9A B:PQQ301 3.8 10.5 1.0
CD2 B:HIS154 3.8 12.7 1.0
O5 B:PQQ301 3.9 14.4 1.0
C3A B:PQQ301 3.9 11.1 1.0
N6 B:PQQ301 3.9 11.1 1.0
CB B:ARG179 4.0 12.3 1.0
C1A B:PQQ301 4.0 9.8 1.0
CG B:ARG179 4.1 12.4 1.0
O4 B:PQQ301 4.1 16.4 1.0
CD B:ARG179 4.2 13.7 1.0
CE1 B:HIS154 4.2 14.8 1.0
OE2 B:GLU147 4.4 14.0 1.0
C9 B:PQQ301 4.5 9.9 1.0
CG B:GLU147 4.5 12.8 1.0
C7 B:PQQ301 4.6 10.1 1.0
CA B:ALA183 4.6 12.0 1.0
O B:ARG179 4.8 13.8 1.0
C3 B:PQQ301 4.9 10.9 1.0
C8 B:PQQ301 4.9 10.4 1.0
CD B:GLU147 5.0 11.6 1.0
CA B:ALA150 5.0 11.9 1.0

Reference:

S.J.Fisher, S.Puehringer. Bond Length Analysis of the Pqqc Y175F Mutant Structure Shows Evidence For Bound Pqq in the Reduced Form To Be Published.
Page generated: Sat Dec 12 10:59:34 2020

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