Chlorine in PDB 4o9d: Structure of DOS1 Propeller

Protein crystallography data

The structure of Structure of DOS1 Propeller, PDB code: 4o9d was solved by C.Kuscu, T.Schalch, L.Joshua-Tor, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.87 / 2.00
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 121.150, 102.790, 95.100, 90.00, 122.36, 90.00
R / Rfree (%) 21.3 / 25

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of DOS1 Propeller (pdb code 4o9d). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of DOS1 Propeller, PDB code: 4o9d:

Chlorine binding site 1 out of 1 in 4o9d

Go back to Chlorine Binding Sites List in 4o9d
Chlorine binding site 1 out of 1 in the Structure of DOS1 Propeller


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of DOS1 Propeller within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl705

b:34.5
occ:1.00
N B:ASN440 3.0 22.1 1.0
N B:VAL480 3.4 27.9 1.0
CB B:ASN440 3.6 26.9 1.0
CA B:LYS479 3.7 32.0 1.0
CA B:PHE439 3.9 25.1 1.0
CA B:ASN440 3.9 25.3 1.0
C B:PHE439 3.9 22.2 1.0
C B:LYS479 4.0 31.0 1.0
CD1 B:PHE439 4.1 27.3 1.0
CG2 B:VAL480 4.2 29.6 1.0
O B:TYR478 4.2 30.8 1.0
CB B:PHE439 4.3 21.7 1.0
CB B:VAL480 4.4 33.1 1.0
NE2 B:GLN437 4.4 30.1 1.0
CG B:LYS479 4.4 41.3 1.0
CA B:VAL480 4.5 33.9 1.0
CB B:LYS479 4.5 34.0 1.0
CG B:PHE439 4.7 21.9 1.0
N B:LYS479 4.8 27.8 1.0
C B:ASN440 4.8 23.1 1.0
O B:LYS438 4.9 25.4 1.0
O B:ASN440 4.9 20.7 1.0
C B:TYR478 4.9 31.0 1.0

Reference:

C.Kuscu, M.Zaratiegui, H.S.Kim, D.A.Wah, R.A.Martienssen, T.Schalch, L.Joshua-Tor. CRL4-Like CLR4 Complex in Schizosaccharomyces Pombe Depends on An Exposed Surface of DOS1 For Heterochromatin Silencing. Proc.Natl.Acad.Sci.Usa V. 111 1795 2014.
ISSN: ISSN 0027-8424
PubMed: 24449894
DOI: 10.1073/PNAS.1313096111
Page generated: Sat Dec 12 11:00:25 2020

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