Atomistry » Chlorine » PDB 4oae-4ogs » 4oas
Atomistry »
  Chlorine »
    PDB 4oae-4ogs »
      4oas »

Chlorine in PDB 4oas: Co-Crystal Structure of MDM2 (17-111) in Complex with Compound 25

Protein crystallography data

The structure of Co-Crystal Structure of MDM2 (17-111) in Complex with Compound 25, PDB code: 4oas was solved by X.Huang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.70
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 56.554, 99.035, 107.076, 90.00, 90.00, 90.00
R / Rfree (%) 21.4 / 23.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Co-Crystal Structure of MDM2 (17-111) in Complex with Compound 25 (pdb code 4oas). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the Co-Crystal Structure of MDM2 (17-111) in Complex with Compound 25, PDB code: 4oas:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in 4oas

Go back to Chlorine Binding Sites List in 4oas
Chlorine binding site 1 out of 6 in the Co-Crystal Structure of MDM2 (17-111) in Complex with Compound 25


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Co-Crystal Structure of MDM2 (17-111) in Complex with Compound 25 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:21.7
occ:1.00
CL2 A:2SW201 0.0 21.7 1.0
C16 A:2SW201 1.7 21.2 1.0
C17 A:2SW201 2.7 20.9 1.0
C15 A:2SW201 2.7 21.5 1.0
CB A:HIS96 3.4 17.8 1.0
CG A:HIS96 3.6 18.9 1.0
O A:HIS96 3.6 17.6 1.0
CA A:HIS96 3.6 18.2 1.0
CG2 A:ILE99 3.6 17.5 1.0
CE2 A:TYR100 3.6 20.0 1.0
CB A:ILE99 3.7 17.5 1.0
CD2 A:TYR100 3.7 18.5 1.0
CD2 A:HIS96 3.9 19.6 1.0
C A:HIS96 4.0 18.3 1.0
C14 A:2SW201 4.0 21.6 1.0
C6 A:2SW201 4.0 20.2 1.0
ND1 A:HIS96 4.1 18.9 1.0
CD1 A:ILE99 4.1 17.9 1.0
CD2 A:LEU54 4.2 17.8 1.0
CZ A:TYR100 4.3 19.9 1.0
CG1 A:ILE99 4.5 17.9 1.0
C13 A:2SW201 4.5 20.8 1.0
CG A:TYR100 4.6 18.3 1.0
NE2 A:HIS96 4.6 19.7 1.0
N A:TYR100 4.6 16.0 1.0
CE1 A:HIS96 4.7 19.5 1.0
N A:HIS96 4.8 19.6 1.0
OH A:TYR100 4.8 21.7 1.0
CA A:ILE99 4.8 16.7 1.0
O A:HOH335 4.9 35.4 1.0
C A:ILE99 4.9 16.1 1.0

Chlorine binding site 2 out of 6 in 4oas

Go back to Chlorine Binding Sites List in 4oas
Chlorine binding site 2 out of 6 in the Co-Crystal Structure of MDM2 (17-111) in Complex with Compound 25


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Co-Crystal Structure of MDM2 (17-111) in Complex with Compound 25 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:22.1
occ:1.00
CL1 A:2SW201 0.0 22.1 1.0
C10 A:2SW201 1.7 19.0 1.0
C11 A:2SW201 2.6 17.3 1.0
C9 A:2SW201 2.7 18.5 1.0
CG2 A:ILE99 3.8 17.5 1.0
CD1 A:ILE61 3.8 14.7 1.0
CE2 A:PHE86 3.9 21.7 1.0
C12 A:2SW201 3.9 18.4 1.0
C8 A:2SW201 4.0 18.4 1.0
CZ A:PHE86 4.0 21.8 1.0
CD1 A:LEU57 4.1 19.4 1.0
CB A:LEU57 4.1 17.1 1.0
CZ A:PHE91 4.2 17.0 1.0
CE1 A:PHE91 4.3 16.3 1.0
CD2 A:LEU57 4.4 21.9 1.0
CG A:LEU57 4.4 19.2 1.0
C7 A:2SW201 4.5 18.1 1.0
CD1 A:ILE103 4.5 15.4 1.0
C A:LEU57 5.0 14.4 1.0
CG1 A:ILE103 5.0 14.3 1.0

Chlorine binding site 3 out of 6 in 4oas

Go back to Chlorine Binding Sites List in 4oas
Chlorine binding site 3 out of 6 in the Co-Crystal Structure of MDM2 (17-111) in Complex with Compound 25


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Co-Crystal Structure of MDM2 (17-111) in Complex with Compound 25 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl201

b:24.6
occ:1.00
CL2 C:2SW201 0.0 24.6 1.0
C16 C:2SW201 1.7 23.9 1.0
C17 C:2SW201 2.7 24.3 1.0
C15 C:2SW201 2.7 24.7 1.0
CB C:HIS96 3.4 23.4 1.0
CG C:HIS96 3.4 24.6 1.0
CA C:HIS96 3.5 23.2 1.0
O C:HIS96 3.6 22.5 1.0
CD2 C:TYR100 3.7 23.6 1.0
CD2 C:HIS96 3.8 24.8 1.0
CB C:ILE99 3.8 18.4 1.0
CE2 C:TYR100 3.8 23.4 1.0
CG2 C:ILE99 3.9 17.8 1.0
CD2 C:LEU54 3.9 19.2 1.0
ND1 C:HIS96 4.0 24.9 1.0
C C:HIS96 4.0 22.5 1.0
CD1 C:ILE99 4.0 18.2 1.0
C6 C:2SW201 4.0 23.2 1.0
C14 C:2SW201 4.1 24.4 1.0
NE2 C:HIS96 4.5 24.8 1.0
CG1 C:ILE99 4.5 18.1 1.0
CE1 C:HIS96 4.5 25.1 1.0
C13 C:2SW201 4.6 24.0 1.0
N C:HIS96 4.7 24.0 1.0
CD1 C:LEU54 4.7 20.3 1.0
N C:TYR100 4.8 17.5 1.0
CG C:TYR100 4.8 21.3 1.0
CZ C:TYR100 4.9 24.4 1.0
CG C:LEU54 5.0 18.5 1.0

Chlorine binding site 4 out of 6 in 4oas

Go back to Chlorine Binding Sites List in 4oas
Chlorine binding site 4 out of 6 in the Co-Crystal Structure of MDM2 (17-111) in Complex with Compound 25


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Co-Crystal Structure of MDM2 (17-111) in Complex with Compound 25 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl201

b:23.8
occ:1.00
CL1 C:2SW201 0.0 23.8 1.0
C10 C:2SW201 1.7 20.9 1.0
C9 C:2SW201 2.7 22.4 1.0
C11 C:2SW201 2.7 21.3 1.0
CD1 C:ILE61 3.6 16.6 1.0
CG2 C:ILE99 3.9 17.8 1.0
C8 C:2SW201 4.0 21.8 1.0
C12 C:2SW201 4.0 21.4 1.0
CB C:LEU57 4.1 17.4 1.0
CD1 C:LEU57 4.1 20.7 1.0
CE2 C:PHE86 4.2 21.0 1.0
CZ C:PHE91 4.2 18.1 1.0
CZ C:PHE86 4.2 20.6 1.0
CE1 C:PHE91 4.3 17.1 1.0
C7 C:2SW201 4.5 21.6 1.0
CD1 C:ILE103 4.6 16.6 1.0
CG C:LEU57 4.8 20.1 1.0
CD1 C:ILE99 4.8 18.2 1.0
CG1 C:ILE61 4.9 17.2 1.0

Chlorine binding site 5 out of 6 in 4oas

Go back to Chlorine Binding Sites List in 4oas
Chlorine binding site 5 out of 6 in the Co-Crystal Structure of MDM2 (17-111) in Complex with Compound 25


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Co-Crystal Structure of MDM2 (17-111) in Complex with Compound 25 within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl201

b:20.9
occ:1.00
CL2 E:2SW201 0.0 20.9 1.0
C16 E:2SW201 1.7 22.2 1.0
C15 E:2SW201 2.6 21.9 1.0
C17 E:2SW201 2.6 22.9 1.0
CE2 E:TYR100 3.6 18.7 1.0
CB E:HIS96 3.6 21.4 1.0
CA E:HIS96 3.7 19.6 1.0
CG E:HIS96 3.7 21.6 1.0
CB E:ILE99 3.8 15.4 1.0
CG2 E:ILE99 3.8 15.8 1.0
O E:HIS96 3.8 17.3 1.0
CD2 E:TYR100 3.9 16.6 1.0
C14 E:2SW201 3.9 23.6 1.0
C6 E:2SW201 3.9 23.2 1.0
CD2 E:HIS96 4.1 22.4 1.0
CZ E:TYR100 4.1 18.6 1.0
CD1 E:ILE99 4.1 15.7 1.0
CD2 E:LEU54 4.2 18.7 1.0
ND1 E:HIS96 4.2 22.8 1.0
C E:HIS96 4.2 18.7 1.0
C13 E:2SW201 4.4 23.6 1.0
OH E:TYR100 4.5 19.9 1.0
CG1 E:ILE99 4.5 15.9 1.0
CG E:TYR100 4.5 17.4 1.0
N E:TYR100 4.6 16.1 1.0
NE2 E:HIS96 4.7 22.6 1.0
CE1 E:TYR100 4.7 18.4 1.0
CE1 E:HIS96 4.8 22.6 1.0
N E:HIS96 4.9 21.0 1.0
CD1 E:TYR100 4.9 17.2 1.0
CA E:ILE99 5.0 15.7 1.0
O E:HOH329 5.0 29.3 1.0

Chlorine binding site 6 out of 6 in 4oas

Go back to Chlorine Binding Sites List in 4oas
Chlorine binding site 6 out of 6 in the Co-Crystal Structure of MDM2 (17-111) in Complex with Compound 25


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Co-Crystal Structure of MDM2 (17-111) in Complex with Compound 25 within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl201

b:25.4
occ:1.00
CL1 E:2SW201 0.0 25.4 1.0
C10 E:2SW201 1.7 23.6 1.0
C11 E:2SW201 2.7 23.1 1.0
C9 E:2SW201 2.7 23.0 1.0
CD1 E:ILE61 3.8 14.2 1.0
CG2 E:ILE99 3.9 15.8 1.0
C12 E:2SW201 4.0 22.8 1.0
CB E:LEU57 4.0 15.9 1.0
CE2 E:PHE86 4.0 19.5 1.0
C8 E:2SW201 4.0 23.0 1.0
CZ E:PHE86 4.0 19.4 1.0
CD1 E:LEU57 4.1 16.4 1.0
CZ E:PHE91 4.3 16.6 1.0
CE1 E:PHE91 4.4 16.2 1.0
C7 E:2SW201 4.5 23.4 1.0
CG E:LEU57 4.6 15.9 1.0
CD1 E:ILE103 4.8 19.2 1.0

Reference:

D.Sun, Z.Li, Y.Rew, M.Gribble, M.D.Bartberger, H.P.Beck, J.Canon, A.Chen, X.Chen, D.Chow, J.Deignan, J.Duquette, J.Eksterowicz, B.Fisher, B.M.Fox, J.Fu, A.Z.Gonzalez, F.Gonzalez-Lopez De Turiso, J.B.Houze, X.Huang, M.Jiang, L.Jin, F.Kayser, J.J.Liu, M.C.Lo, A.M.Long, B.Lucas, L.R.Mcgee, J.Mcintosh, J.Mihalic, J.D.Oliner, T.Osgood, M.L.Peterson, P.Roveto, A.Y.Saiki, P.Shaffer, M.Toteva, Y.Wang, Y.C.Wang, S.Wortman, P.Yakowec, X.Yan, Q.Ye, D.Yu, M.Yu, X.Zhao, J.Zhou, J.Zhu, S.H.Olson, J.C.Medina. Discovery of Amg 232, A Potent, Selective, and Orally Bioavailable MDM2-P53 Inhibitor in Clinical Development. J.Med.Chem. V. 57 1454 2014.
ISSN: ISSN 0022-2623
PubMed: 24456472
DOI: 10.1021/JM401753E
Page generated: Thu Jul 25 23:20:19 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy