Chlorine in PDB 4odl: Structure of Slyd From Thermus Thermophilus in Complex with S2 Peptide

All present enzymatic activity of Structure of Slyd From Thermus Thermophilus in Complex with S2 Peptide:
5.2.1.8;

The structure of Structure of Slyd From Thermus Thermophilus in Complex with S2 Peptide, PDB code: 4odl was solved by E.M.Quistgaard, C.Low, P.Nordlund, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	48.01 / 2.92
Space group	P 62 2 2
Cell size a, b, c (Å), α, β, γ (°)	110.880, 110.880, 182.310, 90.00, 90.00, 120.00
R / Rfree (%)	21 / 22.4

The binding sites of Chlorine atom in the Structure of Slyd From Thermus Thermophilus in Complex with S2 Peptide (pdb code 4odl). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of Slyd From Thermus Thermophilus in Complex with S2 Peptide, PDB code: 4odl:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Structure of Slyd From Thermus Thermophilus in Complex with S2 Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Slyd From Thermus Thermophilus in Complex with S2 Peptide within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl201 b:50.3 occ:1.00 NZ F:LYS28 3.3 71.9 1.0 N A:ALA148 3.4 45.5 1.0 ND2 A:ASN35 3.4 35.1 1.0 N A:LEU30 3.4 42.7 1.0 CA A:TYR29 3.5 40.3 1.0 CG A:ASN35 3.7 31.4 1.0 CB A:ASN35 3.7 27.6 1.0 CB A:ALA148 3.9 41.9 1.0 CE F:LYS28 3.9 42.5 1.0 CB A:TYR29 3.9 38.5 1.0 C A:TYR29 4.0 47.2 1.0 CA A:HIS147 4.1 37.8 1.0 ND1 A:HIS147 4.2 43.0 1.0 O A:SER28 4.2 57.3 1.0 C A:HIS147 4.2 43.9 1.0 CA A:ALA148 4.2 37.7 1.0 CB A:HIS147 4.3 31.6 1.0 CD F:LYS28 4.4 44.0 1.0 CB A:LEU30 4.5 29.4 1.0 CA A:LEU30 4.5 29.7 1.0 OD1 A:ASN35 4.6 43.9 1.0 N A:TYR29 4.7 37.2 1.0 CG A:HIS147 4.7 41.9 1.0 C A:SER28 4.9 45.5 1.0 O A:ALA148 4.9 42.6 1.0

Chlorine binding site 2 out of 2 in the Structure of Slyd From Thermus Thermophilus in Complex with S2 Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Slyd From Thermus Thermophilus in Complex with S2 Peptide within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl201 b:51.4 occ:1.00 NZ E:LYS28 3.1 69.0 1.0 N B:ALA148 3.3 62.3 1.0 N B:LEU30 3.5 39.2 1.0 ND2 B:ASN35 3.5 48.3 1.0 CG B:ASN35 3.7 48.9 1.0 CA B:TYR29 3.7 49.0 1.0 CB B:ASN35 3.7 33.1 1.0 CE E:LYS28 3.8 44.2 1.0 CA B:HIS147 3.8 47.1 1.0 CB B:HIS147 4.0 45.1 1.0 CB B:ALA148 4.0 38.9 1.0 C B:HIS147 4.0 60.6 1.0 CB B:TYR29 4.1 53.9 1.0 C B:TYR29 4.1 42.7 1.0 ND1 B:HIS147 4.2 84.7 1.0 CA B:ALA148 4.2 48.6 1.0 CD E:LYS28 4.3 44.3 1.0 OD1 B:ASN35 4.4 53.5 1.0 O B:SER28 4.4 74.2 1.0 CB B:LEU30 4.4 35.1 1.0 CA B:LEU30 4.5 41.0 1.0 CG B:HIS147 4.5 75.7 1.0 N B:TYR29 4.8 51.7 1.0 O B:ALA148 4.9 64.5 1.0

E.M.Quistgaard, C.Low, P.Nordlund. Structure of Slyd From Thermus Thermophilus in Complex with S2 Peptide To Be Published.