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Chlorine in PDB 4oma: The Crystal Structure of Methionine Gamma-Lyase From Citrobacter Freundii in Complex with L-Cycloserine Pyridoxal-5'-Phosphate

Enzymatic activity of The Crystal Structure of Methionine Gamma-Lyase From Citrobacter Freundii in Complex with L-Cycloserine Pyridoxal-5'-Phosphate

All present enzymatic activity of The Crystal Structure of Methionine Gamma-Lyase From Citrobacter Freundii in Complex with L-Cycloserine Pyridoxal-5'-Phosphate:
4.4.1.11;

Protein crystallography data

The structure of The Crystal Structure of Methionine Gamma-Lyase From Citrobacter Freundii in Complex with L-Cycloserine Pyridoxal-5'-Phosphate, PDB code: 4oma was solved by S.V.Revtovich, A.D.Nikulin, E.A.Morozova, T.V.Demidkina, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 15.00 / 1.60
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 56.270, 122.890, 126.610, 90.00, 90.00, 90.00
R / Rfree (%) 13.9 / 19.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Crystal Structure of Methionine Gamma-Lyase From Citrobacter Freundii in Complex with L-Cycloserine Pyridoxal-5'-Phosphate (pdb code 4oma). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the The Crystal Structure of Methionine Gamma-Lyase From Citrobacter Freundii in Complex with L-Cycloserine Pyridoxal-5'-Phosphate, PDB code: 4oma:

Chlorine binding site 1 out of 1 in 4oma

Go back to Chlorine Binding Sites List in 4oma
Chlorine binding site 1 out of 1 in the The Crystal Structure of Methionine Gamma-Lyase From Citrobacter Freundii in Complex with L-Cycloserine Pyridoxal-5'-Phosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Crystal Structure of Methionine Gamma-Lyase From Citrobacter Freundii in Complex with L-Cycloserine Pyridoxal-5'-Phosphate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl406

b:69.3
occ:0.95
 CG1 A:ILE385 3.1 31.8 1.0
O A:GLU380 3.2 19.9 1.0
ND2 A:ASN271 3.3 21.6 1.0
O A:GLY378 3.6 18.8 1.0
CG A:ASN271 3.6 17.8 1.0
CG1 A:VAL377 3.7 18.1 1.0
CA A:PRO382 3.8 24.6 1.0
CB A:ASN271 3.8 18.4 1.0
C A:GLU380 3.9 24.1 1.0
CB A:ILE385 3.9 22.4 1.0
OE1 A:GLU380 3.9 22.2 1.0
CD1 A:ILE275 3.9 24.1 1.0
N A:GLU380 4.0 22.8 1.0
N A:PRO382 4.0 19.6 1.0
O A:ASP381 4.1 24.2 1.0
C A:ASP381 4.1 21.3 1.0
OG1 A:THR345 4.2 18.8 1.0
CB A:GLU380 4.2 17.7 1.0
C A:GLY378 4.2 17.1 1.0
CD1 A:ILE385 4.3 33.4 1.0
CA A:GLU380 4.3 19.1 1.0
CB A:PRO382 4.3 29.9 1.0
OD1 A:ASN271 4.4 20.2 1.0
CG2 A:ILE385 4.5 23.5 1.0
N A:GLY378 4.5 17.7 1.0
CD A:PRO382 4.5 21.7 1.0
N A:ASP381 4.8 23.3 1.0
C A:LEU379 4.8 22.3 1.0
CD A:GLU380 4.9 16.4 1.0
N A:LEU379 4.9 18.4 1.0
CA A:GLY378 4.9 19.7 1.0
CA A:ASN271 4.9 18.1 1.0
C A:PRO382 4.9 21.7 1.0
CA A:ASP381 5.0 20.4 1.0

Reference:

N.A.Kuznetsov, N.G.Faleev, A.A.Kuznetsova, E.A.Morozova, S.V.Revtovich, N.V.Anufrieva, A.D.Nikulin, O.S.Fedorova, T.V.Demidkina. Pre-Steady-State Kinetic and Structural Analysis of Interaction of Methionine Gamma-Lyase From Citrobacter Freundii with Inhibitors J.Biol.Chem. 2014.
ISSN: ESSN 1083-351X
DOI: 10.1074/JBC.M114.586511
Page generated: Sat Dec 12 11:01:14 2020

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