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Chlorine in PDB 4ony: Crystal Structure of A Abc Transporter, Periplasmic Substrate-Binding Protein From Brucella Melitensis

Protein crystallography data

The structure of Crystal Structure of A Abc Transporter, Periplasmic Substrate-Binding Protein From Brucella Melitensis, PDB code: 4ony was solved by Seattle Structural Gemomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.10
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 64.560, 124.320, 172.190, 90.00, 90.00, 90.00
R / Rfree (%) 15.5 / 19.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Abc Transporter, Periplasmic Substrate-Binding Protein From Brucella Melitensis (pdb code 4ony). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of A Abc Transporter, Periplasmic Substrate-Binding Protein From Brucella Melitensis, PDB code: 4ony:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4ony

Go back to Chlorine Binding Sites List in 4ony
Chlorine binding site 1 out of 2 in the Crystal Structure of A Abc Transporter, Periplasmic Substrate-Binding Protein From Brucella Melitensis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Abc Transporter, Periplasmic Substrate-Binding Protein From Brucella Melitensis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl601

b:19.1
occ:1.00
O A:HOH1094 3.1 22.9 1.0
O A:HOH713 3.1 15.3 1.0
NE1 A:TRP356 3.3 11.8 1.0
N A:SER492 3.3 19.3 1.0
NH1 A:ARG502 3.4 15.4 1.0
OE1 A:GLN499 3.5 16.4 1.0
CA A:SER491 3.5 21.8 1.0
C A:SER491 3.9 21.0 1.0
CE2 A:TRP356 3.9 11.6 1.0
O A:ALA490 4.0 22.5 1.0
O A:HOH792 4.0 14.1 1.0
CB A:PRO495 4.0 15.8 1.0
O A:SER492 4.1 15.7 1.0
CZ2 A:TRP356 4.1 11.2 1.0
CB A:SER491 4.2 22.9 1.0
CD1 A:TRP356 4.2 12.1 1.0
CD A:GLN499 4.4 14.9 1.0
CA A:SER492 4.4 17.4 1.0
CZ A:ARG502 4.4 15.3 1.0
CA A:PRO495 4.4 15.9 1.0
OE2 A:GLU498 4.5 17.3 1.0
N A:SER491 4.6 22.0 1.0
O A:HOH997 4.6 34.6 1.0
OG A:SER492 4.6 18.0 1.0
C A:SER492 4.7 16.5 1.0
C A:ALA490 4.7 23.0 1.0
NH2 A:ARG502 4.7 16.4 1.0
NE2 A:GLN499 4.8 13.8 1.0
CG A:PRO495 4.8 16.0 1.0
N A:PRO495 4.9 16.6 1.0
CB A:SER492 4.9 18.5 1.0
CD A:PRO495 4.9 16.3 1.0

Chlorine binding site 2 out of 2 in 4ony

Go back to Chlorine Binding Sites List in 4ony
Chlorine binding site 2 out of 2 in the Crystal Structure of A Abc Transporter, Periplasmic Substrate-Binding Protein From Brucella Melitensis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Abc Transporter, Periplasmic Substrate-Binding Protein From Brucella Melitensis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl601

b:24.9
occ:1.00
O B:HOH1214 3.0 38.2 1.0
O B:HOH707 3.1 15.1 1.0
NE1 B:TRP356 3.2 13.6 1.0
N B:SER492 3.3 18.6 1.0
CA B:SER491 3.5 21.7 1.0
OE1 B:GLN499 3.5 17.8 1.0
NH1 B:ARG502 3.6 15.9 1.0
O B:ALA490 3.8 35.4 1.0
C B:SER491 3.8 20.9 1.0
CE2 B:TRP356 3.9 13.4 1.0
OG B:SER491 3.9 25.4 1.0
CB B:PRO495 4.0 18.4 1.0
CZ2 B:TRP356 4.0 13.4 1.0
O B:SER492 4.1 17.3 1.0
CD1 B:TRP356 4.1 13.7 1.0
O B:HOH817 4.2 15.1 1.0
CB B:SER491 4.3 23.1 1.0
CA B:PRO495 4.4 18.1 1.0
CA B:SER492 4.4 18.9 1.0
CD B:GLN499 4.5 16.0 1.0
N B:SER491 4.5 23.6 1.0
OE2 B:GLU498 4.5 18.1 1.0
CZ B:ARG502 4.5 16.7 1.0
C B:ALA490 4.6 26.3 1.0
O B:HOH1215 4.6 36.1 1.0
OG B:SER492 4.6 20.3 1.0
C B:SER492 4.7 17.8 1.0
NH2 B:ARG502 4.8 17.4 1.0
CG B:PRO495 4.8 18.8 1.0
N B:PRO495 4.8 18.3 1.0
CB B:SER492 4.9 19.8 1.0
CD B:PRO495 4.9 18.4 1.0
NE2 B:GLN499 4.9 14.6 1.0
O B:SER491 5.0 19.4 1.0

Reference:

J.Abendroth, M.C.Clifton, D.Lorimer, T.Edwards. Crystal Structure of A Abc Transporter, Periplasmic Substrate-Binding Protein From Brucella Melitensis To Be Published.
Page generated: Sat Dec 12 11:01:25 2020

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