Atomistry » Chlorine » PDB 4osg-4oyw » 4ote
Atomistry »
  Chlorine »
    PDB 4osg-4oyw »
      4ote »

Chlorine in PDB 4ote: Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution, PDB code: 4ote was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.11 / 2.20
Space group P 21 3
Cell size a, b, c (Å), α, β, γ (°) 120.508, 120.508, 120.508, 90.00, 90.00, 90.00
R / Rfree (%) 19.7 / 24

Other elements in 4ote:

The structure of Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution also contains other interesting chemical elements:

Zinc (Zn) 22 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution (pdb code 4ote). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution, PDB code: 4ote:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in 4ote

Go back to Chlorine Binding Sites List in 4ote
Chlorine binding site 1 out of 6 in the Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl311

b:46.8
occ:0.33
ZN A:ZN302 1.9 22.4 0.3
O A:HOH437 3.0 48.7 1.0
OD2 A:ASP247 3.2 35.7 1.0
OD1 A:ASP247 3.3 30.3 1.0
CG A:ASP247 3.7 32.0 1.0

Chlorine binding site 2 out of 6 in 4ote

Go back to Chlorine Binding Sites List in 4ote
Chlorine binding site 2 out of 6 in the Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl312

b:62.5
occ:1.00
ZN A:ZN308 2.8 59.2 0.5
OE1 A:GLU230 3.5 60.2 1.0
O A:HOH417 3.7 47.6 1.0
O A:HOH519 3.9 54.5 1.0
CD A:GLU230 4.6 56.8 1.0

Chlorine binding site 3 out of 6 in 4ote

Go back to Chlorine Binding Sites List in 4ote
Chlorine binding site 3 out of 6 in the Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl313

b:33.5
occ:1.00
ZN A:ZN306 2.0 14.7 0.6
NZ A:LYS48 3.0 47.3 1.0
CE A:LYS48 3.1 45.8 1.0
OE2 A:GLU45 3.3 32.2 1.0
N A:VAL60 3.5 29.3 1.0
OE1 A:GLU45 3.5 36.6 1.0
CD A:GLU45 3.8 34.1 1.0
CA A:GLU59 4.1 32.5 0.5
CA A:GLU59 4.1 32.5 0.5
CB A:VAL60 4.1 28.0 1.0
ZN A:ZN306 4.2 11.3 0.3
O A:LEU58 4.2 36.4 1.0
CG2 A:VAL60 4.2 28.0 1.0
C A:GLU59 4.3 31.0 1.0
CA A:VAL60 4.3 28.8 1.0
O A:VAL60 4.4 30.2 1.0
CD A:LYS48 4.6 44.2 1.0
CG A:GLU59 4.8 34.9 0.5
C A:VAL60 4.8 29.6 1.0
C A:LEU58 4.9 34.0 1.0
CB A:GLU59 5.0 33.3 0.5
N A:GLU59 5.0 32.3 1.0

Chlorine binding site 4 out of 6 in 4ote

Go back to Chlorine Binding Sites List in 4ote
Chlorine binding site 4 out of 6 in the Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl314

b:90.2
occ:1.00
ZN A:ZN310 2.8 48.7 0.5
OD1 A:ASP231 3.6 41.8 1.0
OE2 A:GLU230 4.0 60.6 1.0
ZN A:ZN308 4.3 44.2 0.5
CD A:GLU230 4.3 56.8 1.0
OE1 A:GLU230 4.6 60.2 1.0
CG A:ASP231 4.7 42.1 1.0
CG A:GLU230 4.9 52.1 1.0

Chlorine binding site 5 out of 6 in 4ote

Go back to Chlorine Binding Sites List in 4ote
Chlorine binding site 5 out of 6 in the Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl308

b:92.6
occ:1.00
ZN B:ZN303 2.3 45.3 0.6
OD1 B:ASP247 3.1 50.9 1.0
O B:HOH431 3.1 56.6 1.0
O B:HOH408 3.4 40.5 1.0
OD2 B:ASP247 3.6 53.5 1.0
CG B:ASP247 3.7 50.4 1.0
O B:HOH478 4.1 32.6 1.0
NH1 B:ARG250 4.2 53.8 1.0
NH2 B:ARG250 4.3 51.9 1.0
ZN B:ZN303 4.5 47.4 0.4
CZ B:ARG250 4.6 52.1 1.0

Chlorine binding site 6 out of 6 in 4ote

Go back to Chlorine Binding Sites List in 4ote
Chlorine binding site 6 out of 6 in the Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl309

b:59.7
occ:1.00
ZN B:ZN304 3.0 55.9 1.0
O B:HOH484 3.1 53.7 1.0
OD1 B:ASP231 3.7 36.1 1.0
O B:HOH485 4.4 54.5 1.0
OE2 B:GLU230 4.6 55.4 1.0
ZN B:ZN306 4.8 83.8 1.0
CG B:ASP231 4.9 35.5 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Sat Dec 12 11:01:35 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy