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Chlorine in PDB 4ote: Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution, PDB code: 4ote was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.11 / 2.20
Space group P 21 3
Cell size a, b, c (Å), α, β, γ (°) 120.508, 120.508, 120.508, 90.00, 90.00, 90.00
R / Rfree (%) 19.7 / 24

Other elements in 4ote:

The structure of Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution also contains other interesting chemical elements:

Zinc (Zn) 22 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution (pdb code 4ote). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution, PDB code: 4ote:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in 4ote

Go back to Chlorine Binding Sites List in 4ote
Chlorine binding site 1 out of 6 in the Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl311

b:46.8
occ:0.33
ZN A:ZN302 1.9 22.4 0.3
O A:HOH437 3.0 48.7 1.0
OD2 A:ASP247 3.2 35.7 1.0
OD1 A:ASP247 3.3 30.3 1.0
CG A:ASP247 3.7 32.0 1.0

Chlorine binding site 2 out of 6 in 4ote

Go back to Chlorine Binding Sites List in 4ote
Chlorine binding site 2 out of 6 in the Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl312

b:62.5
occ:1.00
ZN A:ZN308 2.8 59.2 0.5
OE1 A:GLU230 3.5 60.2 1.0
O A:HOH417 3.7 47.6 1.0
O A:HOH519 3.9 54.5 1.0
CD A:GLU230 4.6 56.8 1.0

Chlorine binding site 3 out of 6 in 4ote

Go back to Chlorine Binding Sites List in 4ote
Chlorine binding site 3 out of 6 in the Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl313

b:33.5
occ:1.00
ZN A:ZN306 2.0 14.7 0.6
NZ A:LYS48 3.0 47.3 1.0
CE A:LYS48 3.1 45.8 1.0
OE2 A:GLU45 3.3 32.2 1.0
N A:VAL60 3.5 29.3 1.0
OE1 A:GLU45 3.5 36.6 1.0
CD A:GLU45 3.8 34.1 1.0
CA A:GLU59 4.1 32.5 0.5
CA A:GLU59 4.1 32.5 0.5
CB A:VAL60 4.1 28.0 1.0
ZN A:ZN306 4.2 11.3 0.3
O A:LEU58 4.2 36.4 1.0
CG2 A:VAL60 4.2 28.0 1.0
C A:GLU59 4.3 31.0 1.0
CA A:VAL60 4.3 28.8 1.0
O A:VAL60 4.4 30.2 1.0
CD A:LYS48 4.6 44.2 1.0
CG A:GLU59 4.8 34.9 0.5
C A:VAL60 4.8 29.6 1.0
C A:LEU58 4.9 34.0 1.0
CB A:GLU59 5.0 33.3 0.5
N A:GLU59 5.0 32.3 1.0

Chlorine binding site 4 out of 6 in 4ote

Go back to Chlorine Binding Sites List in 4ote
Chlorine binding site 4 out of 6 in the Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl314

b:90.2
occ:1.00
ZN A:ZN310 2.8 48.7 0.5
OD1 A:ASP231 3.6 41.8 1.0
OE2 A:GLU230 4.0 60.6 1.0
ZN A:ZN308 4.3 44.2 0.5
CD A:GLU230 4.3 56.8 1.0
OE1 A:GLU230 4.6 60.2 1.0
CG A:ASP231 4.7 42.1 1.0
CG A:GLU230 4.9 52.1 1.0

Chlorine binding site 5 out of 6 in 4ote

Go back to Chlorine Binding Sites List in 4ote
Chlorine binding site 5 out of 6 in the Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl308

b:92.6
occ:1.00
ZN B:ZN303 2.3 45.3 0.6
OD1 B:ASP247 3.1 50.9 1.0
O B:HOH431 3.1 56.6 1.0
O B:HOH408 3.4 40.5 1.0
OD2 B:ASP247 3.6 53.5 1.0
CG B:ASP247 3.7 50.4 1.0
O B:HOH478 4.1 32.6 1.0
NH1 B:ARG250 4.2 53.8 1.0
NH2 B:ARG250 4.3 51.9 1.0
ZN B:ZN303 4.5 47.4 0.4
CZ B:ARG250 4.6 52.1 1.0

Chlorine binding site 6 out of 6 in 4ote

Go back to Chlorine Binding Sites List in 4ote
Chlorine binding site 6 out of 6 in the Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of A Putative Lipoprotein (CD630_1653) From Clostridium Difficile 630 at 2.20 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl309

b:59.7
occ:1.00
ZN B:ZN304 3.0 55.9 1.0
O B:HOH484 3.1 53.7 1.0
OD1 B:ASP231 3.7 36.1 1.0
O B:HOH485 4.4 54.5 1.0
OE2 B:GLU230 4.6 55.4 1.0
ZN B:ZN306 4.8 83.8 1.0
CG B:ASP231 4.9 35.5 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Thu Jul 25 23:34:50 2024

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