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Chlorine in PDB 4ox5: Structure of the Ldcb Ld-Carboxypeptidase Reveals the Molecular Basis of Peptidoglycan Recognition

Protein crystallography data

The structure of Structure of the Ldcb Ld-Carboxypeptidase Reveals the Molecular Basis of Peptidoglycan Recognition, PDB code: 4ox5 was solved by C.N.Hoyland, C.Aldridge, R.M.Cleverley, K.Sidiq, M.C.Duchene, R.A.Daniel, W.Vollmer, R.J.Lewis, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.95 / 1.80
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 48.855, 60.414, 138.269, 90.00, 90.00, 90.00
R / Rfree (%) 19.1 / 25.1

Other elements in 4ox5:

The structure of Structure of the Ldcb Ld-Carboxypeptidase Reveals the Molecular Basis of Peptidoglycan Recognition also contains other interesting chemical elements:

Zinc (Zn) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of the Ldcb Ld-Carboxypeptidase Reveals the Molecular Basis of Peptidoglycan Recognition (pdb code 4ox5). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of the Ldcb Ld-Carboxypeptidase Reveals the Molecular Basis of Peptidoglycan Recognition, PDB code: 4ox5:

Chlorine binding site 1 out of 1 in 4ox5

Go back to Chlorine Binding Sites List in 4ox5
Chlorine binding site 1 out of 1 in the Structure of the Ldcb Ld-Carboxypeptidase Reveals the Molecular Basis of Peptidoglycan Recognition


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of the Ldcb Ld-Carboxypeptidase Reveals the Molecular Basis of Peptidoglycan Recognition within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl304

b:80.1
occ:1.00
OH A:TYR210 4.0 37.4 1.0
CA A:GLY186 4.5 26.8 1.0
CD A:GLU97 4.5 39.6 1.0
N A:GLY186 4.5 26.8 1.0
OE2 A:GLU97 4.5 51.2 1.0
OE1 A:GLU97 4.6 40.8 1.0
C A:TYR185 4.7 29.0 1.0
N A:LYS213 4.7 27.8 1.0
C A:GLY212 4.7 35.3 1.0
CA A:GLY212 4.9 33.2 1.0
O A:HOH434 4.9 50.2 1.0
O A:TYR185 4.9 30.4 1.0
CA A:LYS213 5.0 33.8 1.0

Reference:

C.N.Hoyland, C.Aldridge, R.M.Cleverley, M.C.Duchene, G.Minasov, O.Onopriyenko, K.Sidiq, P.J.Stogios, W.F.Anderson, R.A.Daniel, A.Savchenko, W.Vollmer, R.J.Lewis. Structure of the Ldcb Ld-Carboxypeptidase Reveals the Molecular Basis of Peptidoglycan Recognition. Structure V. 22 949 2014.
ISSN: ISSN 0969-2126
PubMed: 24909784
DOI: 10.1016/J.STR.2014.04.015
Page generated: Sat Dec 12 11:02:01 2020

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