Chlorine in PDB 4p40: Chlamydia Pneumoniae Copn

The structure of Chlamydia Pneumoniae Copn, PDB code: 4p40 was solved by A.Nawrotek, B.G.Guimaraes, M.Knossow, B.Gigant, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	41.56 / 1.20
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	66.796, 67.970, 85.038, 90.00, 90.00, 90.00
R / Rfree (%)	14.3 / 16.2

The binding sites of Chlorine atom in the Chlamydia Pneumoniae Copn (pdb code 4p40). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Chlamydia Pneumoniae Copn, PDB code: 4p40:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in the Chlamydia Pneumoniae Copn


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Chlamydia Pneumoniae Copn within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl408 b:60.3 occ:1.00 O A:HOH577 2.7 27.4 1.0 HG3 A:GLU134 3.1 38.5 0.5 HA A:GLU134 3.2 32.8 0.5 HA A:GLU134 3.2 32.4 0.5 HB3 A:GLN133 3.5 26.9 1.0 HG2 A:GLU134 3.5 38.5 0.5 CG A:GLU134 3.7 32.1 0.5 HB2 A:GLU134 3.8 34.3 0.5 CA A:GLU134 3.9 27.0 0.5 CA A:GLU134 3.9 27.4 0.5 N A:GLU134 4.0 25.1 1.0 HB2 A:GLN133 4.0 26.9 1.0 C A:GLN133 4.1 23.8 1.0 O A:GLN133 4.1 23.9 1.0 CB A:GLN133 4.2 22.5 1.0 H A:GLU134 4.3 30.1 1.0 CB A:GLU134 4.4 28.6 0.5 CB A:GLU134 4.4 29.7 0.5 HG3 A:GLU134 4.5 36.4 0.5 O A:ALA130 4.7 22.5 1.0 CA A:GLN133 4.8 22.5 1.0 HB3 A:GLU134 4.9 35.6 0.5 OE1 A:GLN133 4.9 26.5 1.0 CG A:GLU134 5.0 30.3 0.5

Chlorine binding site 2 out of 4 in the Chlamydia Pneumoniae Copn


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Chlamydia Pneumoniae Copn within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl409 b:44.1 occ:1.00 H A:SER199 2.3 21.8 1.0 O A:HOH947 2.5 38.4 1.0 O A:HOH945 2.7 29.2 1.0 HG A:SER199 2.9 25.9 0.8 HB A:VAL198 2.9 21.1 1.0 HB3 A:SER199 2.9 22.6 0.2 N A:SER199 3.1 18.2 1.0 HA A:VAL198 3.3 20.7 1.0 HB3 A:SER199 3.4 24.7 0.8 OG A:SER199 3.6 21.6 0.8 CB A:SER199 3.6 18.8 0.2 O A:HOH842 3.6 17.7 1.0 CB A:VAL198 3.7 17.6 1.0 HB2 A:SER199 3.7 22.6 0.2 CA A:VAL198 3.8 17.3 1.0 CB A:SER199 3.9 20.6 0.8 HG11 A:VAL198 3.9 22.1 1.0 C A:VAL198 3.9 17.9 1.0 CA A:SER199 4.0 18.1 0.2 CA A:SER199 4.0 18.6 0.8 CG1 A:VAL198 4.3 18.4 1.0 H31 A:DMN412 4.4 40.8 1.0 O A:HOH682 4.4 23.3 1.0 HA A:SER199 4.6 21.7 0.2 HG12 A:VAL198 4.7 22.1 1.0 HA A:SER199 4.7 22.3 0.8 H32 A:DMN412 4.7 40.8 1.0 HB2 A:SER199 4.8 24.7 0.8 OG A:SER199 4.9 19.1 0.2 HG23 A:VAL198 4.9 20.9 1.0 CG2 A:VAL198 4.9 17.4 1.0 O A:HOH660 4.9 19.5 1.0 HA3 A:GLY202 4.9 20.7 1.0 O A:SER199 5.0 17.1 1.0 HG A:SER199 5.0 22.9 0.2 O A:HOH652 5.0 47.4 1.0

Chlorine binding site 3 out of 4 in the Chlamydia Pneumoniae Copn


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Chlamydia Pneumoniae Copn within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl410 b:58.2 occ:1.00 HG1 A:THR275 2.1 22.5 1.0 OG1 A:THR275 2.9 18.8 1.0 HA A:ALA272 3.1 16.4 1.0 HB A:THR275 3.3 20.2 1.0 HG22 A:THR275 3.4 21.3 1.0 O A:HOH929 3.5 42.9 1.0 CB A:THR275 3.5 16.8 1.0 O A:HOH944 3.8 35.9 1.0 O A:GLN271 3.9 15.0 1.0 CG2 A:THR275 3.9 17.8 1.0 CA A:ALA272 4.0 13.7 1.0 C A:GLN271 4.2 13.9 1.0 N A:ALA272 4.3 13.6 1.0 O A:HOH870 4.3 24.5 1.0 HB1 A:ALA272 4.3 18.5 1.0 HB3 A:GLN271 4.4 16.9 1.0 HB2 A:SER355 4.4 23.4 1.0 HG23 A:THR275 4.4 21.3 1.0 O A:HOH728 4.5 31.3 1.0 H A:THR275 4.6 16.6 1.0 CB A:ALA272 4.6 15.4 1.0 HG21 A:THR275 4.6 21.3 1.0 HB2 A:ALA272 4.8 18.5 1.0 H A:ALA272 4.8 16.4 1.0 O A:HOH656 4.8 19.3 1.0 CA A:THR275 4.9 14.6 1.0 C A:ALA272 5.0 13.5 1.0 O A:ALA272 5.0 13.8 1.0

Chlorine binding site 4 out of 4 in the Chlamydia Pneumoniae Copn


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Chlamydia Pneumoniae Copn within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl411 b:72.4 occ:1.00 O A:HOH590 2.9 33.6 1.0 O A:HOH563 3.0 45.6 1.0 HG22 A:THR172 3.2 22.0 1.0 O A:HOH646 3.2 35.8 1.0 O A:HOH762 3.4 44.3 1.0 OD1 A:ASN169 3.6 21.4 1.0 O A:HOH501 3.6 38.2 1.0 HB A:THR172 3.7 19.3 1.0 CG2 A:THR172 3.9 18.3 1.0 O A:HOH696 3.9 29.9 1.0 HG21 A:THR172 4.0 22.0 1.0 HA A:ASN169 4.0 19.0 1.0 HG1 A:THR172 4.3 21.3 1.0 CB A:THR172 4.3 16.1 1.0 HE2 A:TYR254 4.4 24.3 1.0 CG A:ASN169 4.5 19.1 1.0 HG23 A:THR172 4.8 22.0 1.0 OG1 A:THR172 4.8 17.8 1.0 HB3 A:ASN169 4.9 20.9 1.0 CA A:ASN169 4.9 15.8 1.0 OH A:TYR254 5.0 25.3 1.0

A.Nawrotek, B.G.Guimaraes, C.Velours, A.Subtil, M.Knossow, B.Gigant. Biochemical and Structural Insights Into Microtubule Perturbation By Copn From Chlamydia Pneumoniae. J.Biol.Chem. V. 289 25199 2014.
ISSN: ESSN 1083-351X
PubMed: 25056950
DOI: 10.1074/JBC.M114.568436