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Chlorine in PDB 4p4e: X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor MP1D

Enzymatic activity of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor MP1D

All present enzymatic activity of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor MP1D:
3.4.17.21;

Protein crystallography data

The structure of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor MP1D, PDB code: 4p4e was solved by C.Barinka, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.29 / 1.67
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 101.749, 130.680, 159.522, 90.00, 90.00, 90.00
R / Rfree (%) 15.4 / 18.3

Other elements in 4p4e:

The structure of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor MP1D also contains other interesting chemical elements:

Zinc (Zn) 2 atoms
Calcium (Ca) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor MP1D (pdb code 4p4e). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor MP1D, PDB code: 4p4e:

Chlorine binding site 1 out of 1 in 4p4e

Go back to Chlorine Binding Sites List in 4p4e
Chlorine binding site 1 out of 1 in the X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor MP1D


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor MP1D within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl821

b:28.7
occ:1.00
 O A:HOH973 3.2 27.2 1.0
ND2 A:ASN451 3.2 23.3 1.0
N A:ASP453 3.3 22.7 1.0
NE A:ARG534 3.3 31.7 1.0
O A:HOH1178 3.4 32.6 0.7
NH1 A:ARG534 3.4 34.9 1.0
CB A:ARG534 3.8 21.7 1.0
CB A:ASP453 3.8 22.1 1.0
CZ A:ARG534 3.8 33.8 1.0
NH2 A:ARG580 3.9 22.2 1.0
CA A:ASP453 4.0 22.4 1.0
CB A:ASN451 4.0 19.2 1.0
CG A:ASN451 4.1 23.3 1.0
N A:ALA452 4.1 19.2 1.0
C A:ASN451 4.2 20.7 1.0
C A:ASP453 4.3 24.0 1.0
CA A:ALA452 4.3 21.4 1.0
C A:ALA452 4.3 22.2 1.0
O A:ASN451 4.3 23.7 1.0
O A:ASP453 4.4 25.7 1.0
CD A:ARG534 4.5 29.8 1.0
CG A:ARG534 4.5 24.2 1.0
O A:SER454 4.7 24.5 0.8
CZ A:ARG580 4.7 25.3 1.0
O A:ALA535 4.8 23.0 1.0
CA A:ASN451 4.8 19.2 1.0
CA A:ARG534 4.8 20.9 1.0
N A:ALA535 4.8 21.7 1.0
CD A:ARG536 4.8 35.3 1.0
N A:SER454 5.0 24.1 0.2
N A:SER454 5.0 23.8 0.8

Reference:

C.Barinka, C.Barinka. N/A N/A.
Page generated: Fri Jul 11 20:19:31 2025

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