Chlorine in PDB 4pfn: Crystal Structure of Plasmodium Vivax Shmt with L-Serine Schiff Base

The structure of Crystal Structure of Plasmodium Vivax Shmt with L-Serine Schiff Base, PDB code: 4pfn was solved by P.Chitnumsub, A.Jaruwat, U.Leartsakulpanich, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 2.50
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	100.399, 57.940, 235.918, 90.00, 90.01, 90.00
R / Rfree (%)	20.7 / 26.3

The binding sites of Chlorine atom in the Crystal Structure of Plasmodium Vivax Shmt with L-Serine Schiff Base (pdb code 4pfn). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Plasmodium Vivax Shmt with L-Serine Schiff Base, PDB code: 4pfn:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Crystal Structure of Plasmodium Vivax Shmt with L-Serine Schiff Base


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Plasmodium Vivax Shmt with L-Serine Schiff Base within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl503 b:23.1 occ:1.00 NZ B:LYS277 3.1 16.5 1.0 NZ A:LYS277 3.2 16.1 1.0 ND2 B:ASN276 3.4 16.1 1.0 ND2 A:ASN276 3.5 15.8 1.0 CE A:LYS277 3.6 16.0 1.0 CE B:LYS277 3.7 16.3 1.0 CG B:LYS277 4.0 16.3 1.0 CG A:LYS277 4.0 16.4 1.0 CG B:ASN276 4.3 16.0 1.0 CG A:ASN276 4.4 15.9 1.0 OD1 A:ASN276 4.4 15.8 1.0 OD1 B:ASN276 4.4 15.6 1.0 CD2 B:LEU46 4.4 19.1 1.0 CD2 A:LEU46 4.4 19.8 1.0 CD A:LYS277 4.5 16.3 1.0 CD B:LYS277 4.5 16.1 1.0 CD2 A:HIS274 5.0 15.2 1.0 CD2 B:HIS274 5.0 16.6 1.0

Chlorine binding site 2 out of 2 in the Crystal Structure of Plasmodium Vivax Shmt with L-Serine Schiff Base


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Plasmodium Vivax Shmt with L-Serine Schiff Base within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl503 b:28.9 occ:0.50 ND2 C:ASN276 3.3 15.6 1.0 NZ C:LYS277 3.3 16.5 1.0 CE C:LYS277 3.7 16.3 1.0 CG C:LYS277 4.0 16.9 1.0 CG C:ASN276 4.2 15.8 1.0 OD1 C:ASN276 4.2 15.4 1.0 CD C:LYS277 4.5 16.8 1.0 CD2 C:LEU46 4.6 21.2 1.0 CD2 C:HIS274 4.9 17.8 1.0

P.Chitnumsub, A.Jaruwat, P.Riangrungroj, W.Ittarat, K.Noytanom, W.Oonanant, J.Vanichthanankul, P.Chuankhayan, S.Maenpuen, C.-J.Chen. Structures of Plasmodium Vivax Serine Hydroxymethyltransferase: Implications For Ligand-Binding Specificity and Functional Control Acta Crystallogr.,Sect.D V. 70 3177 2014.
ISSN: ESSN 1399-0047
DOI: 10.1107/S1399004714023128