Chlorine in PDB 4q0h: Deinococcus Radiodurans Bphp Pas-Gaf

All present enzymatic activity of Deinococcus Radiodurans Bphp Pas-Gaf:
2.7.13.3;

The structure of Deinococcus Radiodurans Bphp Pas-Gaf, PDB code: 4q0h was solved by E.S.Burgie, R.D.Vierstra, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	36.14 / 1.16
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	89.536, 51.608, 80.633, 90.00, 116.32, 90.00
R / Rfree (%)	13.1 / 15.7

The binding sites of Chlorine atom in the Deinococcus Radiodurans Bphp Pas-Gaf (pdb code 4q0h). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Deinococcus Radiodurans Bphp Pas-Gaf, PDB code: 4q0h:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Deinococcus Radiodurans Bphp Pas-Gaf


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Deinococcus Radiodurans Bphp Pas-Gaf within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl401 b:23.2 occ:0.66 CL A:CL401 0.0 23.2 0.7 H A:GLY249 2.5 17.1 1.0 CL A:CL401 2.5 35.0 0.3 HA3 A:GLY249 2.8 17.6 1.0 HB2 A:HIS30 2.8 19.4 1.0 HH21 A:ARG218 2.9 39.3 0.4 O A:HOH552 2.9 21.5 1.0 HB3 A:PRO247 2.9 24.8 0.6 HH12 A:ARG218 2.9 41.3 0.6 HH22 A:ARG218 2.9 39.5 0.6 HB2 A:PRO247 3.1 24.9 0.4 HH22 A:ARG218 3.1 39.3 0.4 N A:GLY249 3.2 14.3 1.0 NH2 A:ARG218 3.3 32.8 0.4 CA A:GLY249 3.4 14.6 1.0 O A:HOH762 3.5 55.7 1.0 HD2 A:HIS30 3.5 22.6 1.0 HB2 A:PRO247 3.6 24.8 0.6 CB A:PRO247 3.6 20.6 0.6 HB3 A:PRO247 3.6 24.9 0.4 CB A:HIS30 3.7 16.2 1.0 NH1 A:ARG218 3.7 34.4 0.6 CB A:PRO247 3.7 20.7 0.4 NH2 A:ARG218 3.7 32.9 0.6 HD13 A:LEU215 3.9 22.2 1.0 HB3 A:HIS30 3.9 19.4 1.0 O A:HOH833 3.9 59.1 1.0 H A:LEU248 4.0 18.1 1.0 HA A:PRO247 4.0 22.1 0.4 HA2 A:GLY249 4.1 17.6 1.0 HA A:PRO247 4.1 22.0 0.6 CD2 A:HIS30 4.1 18.9 1.0 N A:LEU248 4.1 15.1 1.0 HD2 A:HIS219 4.1 17.1 0.6 HD2 A:HIS219 4.2 20.4 0.4 HD11 A:LEU215 4.2 22.2 1.0 H A:GLY250 4.2 16.9 0.5 CZ A:ARG218 4.2 33.2 0.6 CA A:PRO247 4.2 18.3 0.6 CA A:PRO247 4.2 18.5 0.4 H A:GLY250 4.2 16.1 0.5 C A:PRO247 4.2 16.0 0.6 C A:PRO247 4.3 16.3 0.4 CG A:HIS30 4.3 16.5 1.0 HH11 A:ARG218 4.4 41.3 0.6 O A:HOH510 4.4 16.4 1.0 HH21 A:ARG218 4.4 39.5 0.6 C A:LEU248 4.4 13.1 1.0 C A:GLY249 4.5 14.4 1.0 CD1 A:LEU215 4.5 18.5 1.0 NE2 A:HIS219 4.5 17.1 0.4 O A:HIS30 4.5 15.8 1.0 N A:GLY250 4.6 14.1 0.5 CD2 A:HIS219 4.6 17.0 0.4 N A:GLY250 4.6 13.4 0.5 CZ A:ARG218 4.7 32.7 0.4 CD2 A:HIS219 4.7 14.2 0.6 HA A:HIS30 4.7 18.1 1.0 CA A:HIS30 4.8 15.1 1.0 HD12 A:LEU215 4.8 22.2 1.0 NE2 A:HIS219 4.8 14.9 0.6 O A:PRO247 4.9 17.0 0.6 CA A:LEU248 4.9 13.8 1.0 O A:PRO247 4.9 17.1 0.4 CG A:PRO247 4.9 20.0 0.6

Chlorine binding site 2 out of 2 in the Deinococcus Radiodurans Bphp Pas-Gaf


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Deinococcus Radiodurans Bphp Pas-Gaf within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl401 b:35.0 occ:0.34 CL A:CL401 0.0 35.0 0.3 HH12 A:ARG218 1.4 41.3 0.6 NH1 A:ARG218 2.2 34.4 0.6 HH21 A:ARG218 2.3 39.3 0.4 CL A:CL401 2.5 23.2 0.7 HH11 A:ARG218 2.6 41.3 0.6 HH22 A:ARG218 2.9 39.5 0.6 O A:HOH762 3.0 55.7 1.0 NH2 A:ARG218 3.0 32.8 0.4 CZ A:ARG218 3.1 33.2 0.6 HD2 A:HIS30 3.3 22.6 1.0 HH22 A:ARG218 3.4 39.3 0.4 NH2 A:ARG218 3.4 32.9 0.6 HB2 A:HIS30 3.4 19.4 1.0 HD13 A:LEU215 3.4 22.2 1.0 HE A:ARG218 3.5 37.1 0.4 O A:HOH559 3.6 30.7 1.0 HB3 A:HIS30 3.6 19.4 1.0 CD2 A:HIS30 3.6 18.9 1.0 CB A:HIS30 3.8 16.2 1.0 CG A:HIS30 3.8 16.5 1.0 O A:HOH884 3.9 58.7 1.0 CZ A:ARG218 3.9 32.7 0.4 NE A:ARG218 4.0 30.9 0.4 HH21 A:ARG218 4.2 39.5 0.6 CD1 A:LEU215 4.2 18.5 1.0 HD12 A:LEU215 4.3 22.2 1.0 HB3 A:PRO247 4.3 24.8 0.6 NE A:ARG218 4.3 31.7 0.6 HA3 A:GLY249 4.4 17.6 1.0 HD3 A:ARG218 4.5 34.6 0.6 HD11 A:LEU215 4.5 22.2 1.0 NE2 A:HIS30 4.6 19.9 1.0 O A:HOH833 4.7 59.1 1.0 HD2 A:HIS219 4.7 20.4 0.4 HD2 A:HIS219 4.7 17.1 0.6 O A:HOH552 4.7 21.5 1.0 H A:GLY249 4.8 17.1 1.0 ND1 A:HIS30 4.8 16.7 1.0 O A:HOH814 4.8 21.0 0.3 HB3 A:PRO247 4.9 24.9 0.4 CD A:ARG218 4.9 28.9 0.6 HE2 A:HIS30 4.9 23.8 1.0 O A:HOH814 4.9 21.7 0.7 HE A:ARG218 5.0 38.0 0.6

E.S.Burgie, T.Wang, A.N.Bussell, J.M.Walker, H.Li, R.D.Vierstra. Crystallographic and Electron Microscopic Analyses of A Bacterial Phytochrome Reveal Local and Global Rearrangements During Photoconversion. J.Biol.Chem. V. 289 24573 2014.
ISSN: ISSN 0021-9258
PubMed: 25006244
DOI: 10.1074/JBC.M114.571661