Chlorine in PDB 4q14: Crystal Structure of 5-Hydroxyisourate Hydrolase From Brucella Melitensis
Protein crystallography data
The structure of Crystal Structure of 5-Hydroxyisourate Hydrolase From Brucella Melitensis, PDB code: 4q14
was solved by
Seattle Structural Genomics Center For Infectious Disease (Ssgcid),
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
32.59 /
1.70
|
Space group
|
P 65 2 2
|
Cell size a, b, c (Å), α, β, γ (°)
|
83.190,
83.190,
153.110,
90.00,
90.00,
120.00
|
R / Rfree (%)
|
15.7 /
17.8
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of 5-Hydroxyisourate Hydrolase From Brucella Melitensis
(pdb code 4q14). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the
Crystal Structure of 5-Hydroxyisourate Hydrolase From Brucella Melitensis, PDB code: 4q14:
Jump to Chlorine binding site number:
1;
2;
3;
Chlorine binding site 1 out
of 3 in 4q14
Go back to
Chlorine Binding Sites List in 4q14
Chlorine binding site 1 out
of 3 in the Crystal Structure of 5-Hydroxyisourate Hydrolase From Brucella Melitensis
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of 5-Hydroxyisourate Hydrolase From Brucella Melitensis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl200
b:20.6
occ:1.00
|
O
|
B:HOH337
|
3.2
|
24.1
|
1.0
|
N
|
A:PHE84
|
3.3
|
16.5
|
1.0
|
N
|
A:ALA80
|
3.3
|
26.1
|
1.0
|
NE1
|
A:TRP110
|
3.3
|
21.2
|
1.0
|
O
|
A:HOH400
|
3.4
|
49.4
|
1.0
|
O
|
A:HOH302
|
3.4
|
15.1
|
1.0
|
CA
|
A:PRO83
|
3.8
|
18.9
|
1.0
|
CB
|
A:ALA80
|
3.9
|
27.8
|
1.0
|
CA
|
A:LEU79
|
4.0
|
25.1
|
1.0
|
CE2
|
A:TRP110
|
4.0
|
18.6
|
1.0
|
C
|
A:PRO83
|
4.0
|
17.1
|
1.0
|
CZ2
|
A:TRP110
|
4.1
|
25.0
|
1.0
|
CB
|
A:PHE84
|
4.1
|
15.1
|
1.0
|
CB
|
A:LEU79
|
4.1
|
23.2
|
1.0
|
C
|
A:LEU79
|
4.2
|
26.6
|
1.0
|
CD2
|
A:LEU79
|
4.2
|
25.3
|
1.0
|
CA
|
A:ALA80
|
4.2
|
26.6
|
1.0
|
CA
|
A:PHE84
|
4.3
|
15.5
|
1.0
|
O
|
B:HOH379
|
4.3
|
31.5
|
1.0
|
CD1
|
A:TRP110
|
4.4
|
18.9
|
1.0
|
CB
|
A:PRO83
|
4.5
|
18.2
|
1.0
|
O
|
B:HOH314
|
4.7
|
20.5
|
1.0
|
CG
|
A:LEU79
|
4.8
|
26.9
|
1.0
|
O
|
A:GLU82
|
4.8
|
22.1
|
1.0
|
N
|
A:PRO83
|
4.9
|
20.4
|
1.0
|
O
|
A:GLU78
|
5.0
|
37.3
|
1.0
|
|
Chlorine binding site 2 out
of 3 in 4q14
Go back to
Chlorine Binding Sites List in 4q14
Chlorine binding site 2 out
of 3 in the Crystal Structure of 5-Hydroxyisourate Hydrolase From Brucella Melitensis
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of 5-Hydroxyisourate Hydrolase From Brucella Melitensis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl201
b:28.9
occ:1.00
|
O
|
A:HOH427
|
3.2
|
54.9
|
1.0
|
OG
|
A:SER5
|
3.3
|
22.9
|
1.0
|
O
|
A:HOH317
|
3.4
|
23.1
|
1.0
|
CB
|
A:HIS102
|
3.4
|
21.6
|
1.0
|
C
|
A:THR6
|
3.6
|
12.6
|
1.0
|
CA
|
A:THR6
|
3.7
|
13.6
|
1.0
|
ND1
|
A:HIS102
|
3.8
|
41.2
|
1.0
|
O
|
A:SER5
|
3.8
|
13.6
|
1.0
|
N
|
A:THR6
|
3.8
|
13.9
|
1.0
|
C
|
A:SER5
|
3.8
|
14.7
|
1.0
|
O
|
A:THR6
|
3.8
|
14.9
|
1.0
|
N
|
A:HIS7
|
3.9
|
11.3
|
1.0
|
CA
|
A:HIS102
|
3.9
|
14.6
|
1.0
|
CB
|
A:HIS7
|
3.9
|
13.8
|
1.0
|
N
|
A:VAL103
|
4.0
|
13.9
|
1.0
|
CG
|
A:HIS102
|
4.0
|
29.6
|
1.0
|
CB
|
A:SER5
|
4.1
|
19.1
|
1.0
|
C
|
A:HIS102
|
4.2
|
19.0
|
1.0
|
NH1
|
A:ARG46
|
4.3
|
19.7
|
1.0
|
CD
|
A:PRO104
|
4.5
|
14.5
|
1.0
|
N
|
A:PRO104
|
4.5
|
11.3
|
1.0
|
CA
|
A:HIS7
|
4.5
|
13.2
|
1.0
|
C
|
A:VAL103
|
4.6
|
14.7
|
1.0
|
CA
|
A:SER5
|
4.6
|
13.7
|
1.0
|
CA
|
A:PRO104
|
4.8
|
11.6
|
1.0
|
O
|
A:VAL103
|
4.9
|
18.9
|
1.0
|
CA
|
A:VAL103
|
5.0
|
12.6
|
1.0
|
CE1
|
A:HIS102
|
5.0
|
37.9
|
1.0
|
|
Chlorine binding site 3 out
of 3 in 4q14
Go back to
Chlorine Binding Sites List in 4q14
Chlorine binding site 3 out
of 3 in the Crystal Structure of 5-Hydroxyisourate Hydrolase From Brucella Melitensis
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of 5-Hydroxyisourate Hydrolase From Brucella Melitensis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl201
b:16.1
occ:1.00
|
O
|
A:HOH328
|
3.3
|
18.9
|
1.0
|
N
|
B:ALA80
|
3.3
|
21.6
|
1.0
|
NE1
|
B:TRP110
|
3.3
|
18.5
|
1.0
|
N
|
B:PHE84
|
3.3
|
13.2
|
1.0
|
O
|
B:HOH307
|
3.4
|
16.4
|
1.0
|
O
|
A:HOH392
|
3.5
|
39.0
|
1.0
|
CA
|
B:PRO83
|
3.8
|
14.7
|
1.0
|
CB
|
B:ALA80
|
3.8
|
19.2
|
1.0
|
CB
|
B:LEU79
|
4.0
|
17.9
|
1.0
|
CA
|
B:LEU79
|
4.0
|
19.3
|
1.0
|
C
|
B:PRO83
|
4.1
|
14.2
|
1.0
|
C
|
B:LEU79
|
4.1
|
21.0
|
1.0
|
CB
|
B:PHE84
|
4.1
|
13.4
|
1.0
|
CA
|
B:ALA80
|
4.1
|
20.2
|
1.0
|
CD1
|
B:TRP110
|
4.2
|
16.0
|
1.0
|
CE2
|
B:TRP110
|
4.2
|
15.6
|
1.0
|
NH1
|
A:ARG116
|
4.2
|
23.0
|
1.0
|
CD2
|
B:LEU79
|
4.3
|
20.7
|
1.0
|
CA
|
B:PHE84
|
4.3
|
12.4
|
1.0
|
CB
|
B:PRO83
|
4.4
|
17.2
|
1.0
|
CZ2
|
B:TRP110
|
4.5
|
18.3
|
1.0
|
CG
|
B:LEU79
|
4.7
|
22.1
|
1.0
|
O
|
B:GLU82
|
4.8
|
19.4
|
1.0
|
O
|
B:HOH306
|
4.9
|
15.7
|
1.0
|
O
|
B:ALA80
|
4.9
|
22.1
|
1.0
|
N
|
B:PRO83
|
5.0
|
15.9
|
1.0
|
|
Reference:
Seattle Structural Genomics Center For Infectious Disease(Ssgcid),
J.Abendroth,
D.Lorimer,
T.E.Edwards.
Crystal Structure of 5-Hydroxyisourate Hydrolase From Brucella Melitensis To Be Published.
Page generated: Fri Jul 26 00:15:26 2024
|