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Chlorine in PDB 4qb7: Crystal Structure of A Hypothetical Protein (BVU_2522) From Bacteroides Vulgatus Atcc 8482 at 2.55 A Resolution (Psi Community Target, Nakayama)

Protein crystallography data

The structure of Crystal Structure of A Hypothetical Protein (BVU_2522) From Bacteroides Vulgatus Atcc 8482 at 2.55 A Resolution (Psi Community Target, Nakayama), PDB code: 4qb7 was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.61 / 2.55
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 54.220, 186.120, 211.830, 90.00, 90.00, 90.00
R / Rfree (%) 16.8 / 19.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Hypothetical Protein (BVU_2522) From Bacteroides Vulgatus Atcc 8482 at 2.55 A Resolution (Psi Community Target, Nakayama) (pdb code 4qb7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the Crystal Structure of A Hypothetical Protein (BVU_2522) From Bacteroides Vulgatus Atcc 8482 at 2.55 A Resolution (Psi Community Target, Nakayama), PDB code: 4qb7:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in 4qb7

Go back to Chlorine Binding Sites List in 4qb7
Chlorine binding site 1 out of 6 in the Crystal Structure of A Hypothetical Protein (BVU_2522) From Bacteroides Vulgatus Atcc 8482 at 2.55 A Resolution (Psi Community Target, Nakayama)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Hypothetical Protein (BVU_2522) From Bacteroides Vulgatus Atcc 8482 at 2.55 A Resolution (Psi Community Target, Nakayama) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl418

b:81.2
occ:1.00
O A:ASN271 3.5 47.2 1.0
N A:ASP274 3.6 45.8 1.0
OG1 A:THR279 3.7 41.2 1.0
CB A:ASP274 3.7 48.3 1.0
N A:SER273 3.9 40.2 1.0
OD1 A:ASN271 3.9 51.3 1.0
O A:HOH556 4.1 46.7 1.0
CG A:ASN271 4.2 53.1 1.0
C A:ASN271 4.2 44.9 1.0
CA A:ASP274 4.3 46.2 1.0
O A:HOH637 4.3 57.9 1.0
C A:VAL272 4.4 42.6 1.0
C A:SER273 4.4 48.9 1.0
CA A:SER273 4.5 40.5 1.0
CA A:VAL272 4.6 38.0 1.0
O A:HOH534 4.6 47.6 1.0
ND2 A:ASN271 4.6 49.7 1.0
CB A:ASN271 4.7 40.7 1.0
N A:VAL272 4.7 39.4 1.0
CB A:SER273 4.7 42.3 1.0
O A:HOH509 4.7 42.1 1.0
O A:HOH633 4.8 58.7 1.0
CB A:THR279 4.8 38.4 1.0
CG A:ASP274 4.8 58.1 1.0
OD2 A:ASP274 4.9 69.6 1.0
CG2 A:THR279 4.9 31.2 1.0

Chlorine binding site 2 out of 6 in 4qb7

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Chlorine binding site 2 out of 6 in the Crystal Structure of A Hypothetical Protein (BVU_2522) From Bacteroides Vulgatus Atcc 8482 at 2.55 A Resolution (Psi Community Target, Nakayama)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Hypothetical Protein (BVU_2522) From Bacteroides Vulgatus Atcc 8482 at 2.55 A Resolution (Psi Community Target, Nakayama) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl419

b:80.1
occ:1.00
N A:THR259 3.5 51.0 1.0
CB A:THR258 3.7 52.0 1.0
OG1 A:THR259 3.7 64.3 1.0
CA A:THR258 3.8 46.2 1.0
CG2 A:THR258 3.9 46.7 1.0
CG2 A:THR259 4.0 56.6 1.0
C A:THR258 4.1 52.2 1.0
O A:HOH705 4.3 67.3 1.0
CB A:THR259 4.3 60.4 1.0
CA A:THR259 4.5 51.4 1.0
OG1 A:THR258 5.0 52.8 1.0

Chlorine binding site 3 out of 6 in 4qb7

Go back to Chlorine Binding Sites List in 4qb7
Chlorine binding site 3 out of 6 in the Crystal Structure of A Hypothetical Protein (BVU_2522) From Bacteroides Vulgatus Atcc 8482 at 2.55 A Resolution (Psi Community Target, Nakayama)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of A Hypothetical Protein (BVU_2522) From Bacteroides Vulgatus Atcc 8482 at 2.55 A Resolution (Psi Community Target, Nakayama) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl420

b:90.3
occ:1.00
N A:THR150 3.1 51.6 1.0
OG1 A:THR150 3.3 52.0 1.0
CA A:LYS149 3.8 49.2 1.0
N A:SER151 3.9 53.1 1.0
CE A:LYS130 3.9 74.6 1.0
C A:LYS149 4.0 52.5 1.0
O A:VAL148 4.0 51.6 1.0
CA A:THR150 4.0 51.3 1.0
CB A:THR150 4.2 53.2 1.0
C A:THR150 4.4 56.3 1.0
CB A:SER151 4.6 56.2 1.0
CG A:LYS149 4.6 58.9 1.0
CG2 A:THR150 4.7 52.9 1.0
CD A:LYS130 4.7 62.5 1.0
NZ A:LYS130 4.8 89.3 1.0
O A:HOH642 4.8 59.6 1.0
CA A:SER151 4.8 52.7 1.0
N A:LYS149 4.8 49.6 1.0
CB A:LYS149 4.8 50.9 1.0
OG A:SER151 4.8 69.8 1.0
C A:VAL148 4.8 51.5 1.0
OE2 A:GLU147 5.0 77.8 1.0

Chlorine binding site 4 out of 6 in 4qb7

Go back to Chlorine Binding Sites List in 4qb7
Chlorine binding site 4 out of 6 in the Crystal Structure of A Hypothetical Protein (BVU_2522) From Bacteroides Vulgatus Atcc 8482 at 2.55 A Resolution (Psi Community Target, Nakayama)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of A Hypothetical Protein (BVU_2522) From Bacteroides Vulgatus Atcc 8482 at 2.55 A Resolution (Psi Community Target, Nakayama) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl421

b:79.9
occ:1.00
N A:GLU248 3.4 48.6 1.0
CA A:THR247 3.9 48.4 1.0
CB A:THR247 3.9 53.3 1.0
O A:HOH771 4.0 77.0 1.0
CB A:GLU248 4.1 48.6 1.0
C A:THR247 4.1 50.5 1.0
CG A:GLU248 4.1 58.2 1.0
CG2 A:THR247 4.3 43.4 1.0
CA A:GLU248 4.3 47.3 1.0
CD A:GLU248 4.7 77.2 1.0
O A:HOH638 4.8 56.8 1.0
OE1 A:GLU248 4.8 70.1 1.0

Chlorine binding site 5 out of 6 in 4qb7

Go back to Chlorine Binding Sites List in 4qb7
Chlorine binding site 5 out of 6 in the Crystal Structure of A Hypothetical Protein (BVU_2522) From Bacteroides Vulgatus Atcc 8482 at 2.55 A Resolution (Psi Community Target, Nakayama)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of A Hypothetical Protein (BVU_2522) From Bacteroides Vulgatus Atcc 8482 at 2.55 A Resolution (Psi Community Target, Nakayama) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl422

b:84.7
occ:1.00
N A:ALA302 3.3 53.9 1.0
O A:HOH743 3.3 71.4 1.0
CB A:ALA302 3.7 53.3 1.0
CD A:LYS336 3.9 59.7 1.0
CA A:ASN301 4.0 53.7 1.0
CA A:ALA302 4.1 52.3 1.0
C A:ASN301 4.2 57.9 1.0
CB A:LYS336 4.2 51.3 1.0
CG A:LYS336 4.2 51.7 1.0
CB A:ASN301 4.4 52.8 1.0
O A:HOH695 4.5 64.0 1.0
CE A:LYS336 4.7 77.4 1.0
ND2 A:ASN301 4.7 56.3 1.0

Chlorine binding site 6 out of 6 in 4qb7

Go back to Chlorine Binding Sites List in 4qb7
Chlorine binding site 6 out of 6 in the Crystal Structure of A Hypothetical Protein (BVU_2522) From Bacteroides Vulgatus Atcc 8482 at 2.55 A Resolution (Psi Community Target, Nakayama)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of A Hypothetical Protein (BVU_2522) From Bacteroides Vulgatus Atcc 8482 at 2.55 A Resolution (Psi Community Target, Nakayama) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl423

b:92.4
occ:1.00
N A:SER219 3.2 56.5 1.0
OG1 A:THR221 3.2 53.4 1.0
N A:THR220 3.3 55.2 1.0
OG A:SER219 3.6 78.8 1.0
OG1 A:THR220 3.8 68.1 1.0
CA A:GLY218 3.9 53.6 1.0
O A:HOH757 3.9 71.3 1.0
C A:GLY218 4.0 59.4 1.0
CA A:SER219 4.1 57.1 1.0
C A:SER219 4.2 60.7 1.0
CA A:THR220 4.2 54.7 1.0
C A:THR220 4.3 55.5 1.0
N A:THR221 4.3 49.1 1.0
CB A:THR221 4.4 51.6 1.0
CB A:SER219 4.4 63.7 1.0
CB A:THR220 4.6 63.6 1.0
O A:PRO217 4.8 54.0 1.0
O A:THR220 4.9 55.8 1.0
CA A:THR221 5.0 47.0 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Sat Dec 12 11:05:01 2020

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