Atomistry » Chlorine » PDB 4q5r-4qgn » 4qcf
Atomistry »
  Chlorine »
    PDB 4q5r-4qgn »
      4qcf »

Chlorine in PDB 4qcf: Crystal Structure of N-Terminal Mutant (V1A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27

Enzymatic activity of Crystal Structure of N-Terminal Mutant (V1A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27

All present enzymatic activity of Crystal Structure of N-Terminal Mutant (V1A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27:
3.2.1.8;

Protein crystallography data

The structure of Crystal Structure of N-Terminal Mutant (V1A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27, PDB code: 4qcf was solved by P.Mahanta, A.Bhardwaj, V.S.Reddy, S.Ramakumar, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.78 / 2.26
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 73.570, 80.120, 69.900, 90.00, 110.81, 90.00
R / Rfree (%) 17.4 / 22.5

Other elements in 4qcf:

The structure of Crystal Structure of N-Terminal Mutant (V1A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27 also contains other interesting chemical elements:

Magnesium (Mg) 1 atom
Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of N-Terminal Mutant (V1A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27 (pdb code 4qcf). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of N-Terminal Mutant (V1A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27, PDB code: 4qcf:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 4qcf

Go back to Chlorine Binding Sites List in 4qcf
Chlorine binding site 1 out of 3 in the Crystal Structure of N-Terminal Mutant (V1A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of N-Terminal Mutant (V1A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl402

b:43.1
occ:1.00
N A:ASP95 3.1 32.4 1.0
O A:HOH618 3.2 30.9 1.0
O A:HOH543 3.4 28.6 1.0
CG A:ASP95 3.6 34.1 1.0
OD1 A:ASP95 3.7 33.3 1.0
CA A:PRO94 3.7 31.3 1.0
CB A:ASP95 3.7 34.5 1.0
CD1 A:ILE54 3.9 26.5 1.0
C A:PRO94 3.9 31.7 1.0
CA A:ASP95 4.0 33.3 1.0
OD2 A:ASP95 4.1 35.3 1.0
CB A:PRO94 4.3 31.8 1.0
O A:VAL93 4.8 30.1 1.0
N A:PRO94 4.9 30.3 1.0

Chlorine binding site 2 out of 3 in 4qcf

Go back to Chlorine Binding Sites List in 4qcf
Chlorine binding site 2 out of 3 in the Crystal Structure of N-Terminal Mutant (V1A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of N-Terminal Mutant (V1A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl403

b:26.3
occ:0.50
O A:HOH502 3.2 13.8 1.0
O A:HOH564 3.3 14.6 1.0
NE2 A:GLN285 3.4 19.1 1.0
CB A:PRO347 3.9 16.8 1.0
OE1 A:GLN285 4.3 19.0 1.0
CD A:GLN285 4.3 19.1 1.0
CA A:PRO347 4.4 16.4 1.0
CG A:PRO347 4.6 17.1 1.0
O A:HOH553 4.7 17.4 1.0
CD A:ARG351 4.8 18.9 1.0
O A:PRO347 4.9 16.1 1.0

Chlorine binding site 3 out of 3 in 4qcf

Go back to Chlorine Binding Sites List in 4qcf
Chlorine binding site 3 out of 3 in the Crystal Structure of N-Terminal Mutant (V1A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of N-Terminal Mutant (V1A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl404

b:25.1
occ:0.50
ND2 A:ASN292 3.3 22.7 1.0
NE2 A:GLN293 3.3 27.5 1.0
CG A:GLN293 3.5 25.6 1.0
O A:ASP289 3.5 19.9 1.0
CD A:GLN293 3.9 26.9 1.0
NH2 A:ARG351 4.0 20.4 1.0
CB A:ASN292 4.1 21.1 1.0
CG A:ASN292 4.2 21.9 1.0
CA A:ASP289 4.2 20.2 1.0
C A:ASP289 4.2 19.7 1.0
CB A:ASP289 4.3 21.6 1.0
OD1 A:ASP289 4.3 23.4 1.0
N A:GLN293 4.6 22.2 1.0
CG A:ASP289 4.7 22.9 1.0
CB A:GLN293 4.8 24.3 1.0
O A:HOH580 4.9 24.1 1.0
CZ A:ARG351 5.0 19.8 1.0

Reference:

P.Mahanta, A.Bhardwaj, K.Kumar, V.S.Reddy, S.Ramakumar. Crystal Structure of N-Terminal Mutant (V1A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27 To Be Published.
Page generated: Sat Dec 12 11:05:05 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy