Chlorine in PDB 4qv8: Ycp BETA5-C52F Mutant

All present enzymatic activity of Ycp BETA5-C52F Mutant:
3.4.25.1;

The structure of Ycp BETA5-C52F Mutant, PDB code: 4qv8 was solved by E.M.Huber, W.Heinemeyer, M.Groll, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	15.00 / 2.90
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	135.180, 300.700, 144.400, 90.00, 112.95, 90.00
R / Rfree (%)	19.2 / 22.1

The structure of Ycp BETA5-C52F Mutant also contains other interesting chemical elements:

Magnesium

(Mg)

9 atoms

The binding sites of Chlorine atom in the Ycp BETA5-C52F Mutant (pdb code 4qv8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Ycp BETA5-C52F Mutant, PDB code: 4qv8:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Ycp BETA5-C52F Mutant


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Ycp BETA5-C52F Mutant within 5.0Å range: probe atom residue distance (Å) B Occ G:Cl302 b:36.1 occ:1.00 OH H:TYR69 2.9 37.5 1.0 NH1 G:ARG111 3.1 38.2 1.0 OD1 G:ASN114 3.2 43.5 1.0 CE2 H:TYR69 3.7 34.7 1.0 CB G:ASN114 3.7 37.9 1.0 CZ H:TYR69 3.7 35.5 1.0 CD G:ARG111 3.8 37.6 1.0 CG G:ASN114 3.8 39.8 1.0 CZ G:ARG111 4.2 38.7 1.0 NE G:ARG111 4.4 38.4 1.0 CA G:ARG111 4.7 37.5 1.0 O G:ARG111 4.8 39.3 1.0 OD2 A:ASP87 4.9 43.5 1.0 CD2 H:TYR69 5.0 34.5 1.0

Chlorine binding site 2 out of 2 in the Ycp BETA5-C52F Mutant


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Ycp BETA5-C52F Mutant within 5.0Å range: probe atom residue distance (Å) B Occ U:Cl301 b:45.2 occ:1.00 OH V:TYR69 2.9 41.6 1.0 NH1 U:ARG111 3.0 43.7 1.0 OD1 U:ASN114 3.2 48.0 1.0 CB U:ASN114 3.6 43.1 1.0 CD U:ARG111 3.7 42.1 1.0 CE2 V:TYR69 3.7 44.5 1.0 CZ V:TYR69 3.7 44.5 1.0 CG U:ASN114 3.8 45.9 1.0 CZ U:ARG111 4.1 43.2 1.0 NE U:ARG111 4.3 43.5 1.0 CA U:ARG111 4.6 40.2 1.0 O U:ARG111 4.7 40.3 1.0 OD2 O:ASP87 5.0 46.7 1.0 CG U:ARG111 5.0 41.3 1.0 ND2 U:ASN114 5.0 44.8 1.0

E.M.Huber, W.Heinemeyer, M.Groll. Bortezomib-Resistant Mutant Proteasomes: Structural and Biochemical Evaluation with Carfilzomib and Onx 0914. Structure 2015.
ISSN: ISSN 0969-2126
PubMed: 25599643
DOI: 10.1016/J.STR.2014.11.019