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Chlorine in PDB 4r01: Crystal Structure of SP1627, A Putative Nadh-Flavin Reductase, From Streptococcus Pneumoniae TIGR4

Protein crystallography data

The structure of Crystal Structure of SP1627, A Putative Nadh-Flavin Reductase, From Streptococcus Pneumoniae TIGR4, PDB code: 4r01 was solved by P.J.Stogios, O.Onopriyenko, A.Savchenko, W.F.Anderson, Center Forstructural Genomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.58 / 2.40
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 160.030, 82.960, 43.790, 90.00, 105.56, 90.00
R / Rfree (%) 18.5 / 24.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of SP1627, A Putative Nadh-Flavin Reductase, From Streptococcus Pneumoniae TIGR4 (pdb code 4r01). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of SP1627, A Putative Nadh-Flavin Reductase, From Streptococcus Pneumoniae TIGR4, PDB code: 4r01:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 4r01

Go back to Chlorine Binding Sites List in 4r01
Chlorine binding site 1 out of 4 in the Crystal Structure of SP1627, A Putative Nadh-Flavin Reductase, From Streptococcus Pneumoniae TIGR4


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of SP1627, A Putative Nadh-Flavin Reductase, From Streptococcus Pneumoniae TIGR4 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:88.0
occ:1.00
N A:GLU169 3.6 42.5 1.0
O A:HOH401 3.8 35.0 1.0
CA A:GLY168 4.1 39.0 1.0
CG1 A:ILE170 4.2 37.6 1.0
CD1 A:ILE170 4.3 39.9 1.0
C A:GLY168 4.3 39.8 1.0
N A:ILE170 4.3 34.0 1.0
CB A:GLU169 4.4 46.8 1.0
CA A:GLU169 4.5 41.6 1.0
CB A:ILE170 4.7 35.6 1.0
NZ A:LYS109 4.8 49.2 1.0
N A:GLY168 4.8 41.3 1.0
C A:GLU169 4.9 37.3 1.0

Chlorine binding site 2 out of 4 in 4r01

Go back to Chlorine Binding Sites List in 4r01
Chlorine binding site 2 out of 4 in the Crystal Structure of SP1627, A Putative Nadh-Flavin Reductase, From Streptococcus Pneumoniae TIGR4


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of SP1627, A Putative Nadh-Flavin Reductase, From Streptococcus Pneumoniae TIGR4 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:79.5
occ:1.00
N A:GLU159 3.6 45.4 1.0
CA A:GLY158 4.0 43.6 1.0
CB A:GLU159 4.2 49.7 1.0
C A:GLY158 4.3 45.2 1.0
CA A:GLU159 4.5 47.5 1.0
O A:ASP157 4.7 48.8 1.0
O A:HOH466 4.9 46.4 1.0

Chlorine binding site 3 out of 4 in 4r01

Go back to Chlorine Binding Sites List in 4r01
Chlorine binding site 3 out of 4 in the Crystal Structure of SP1627, A Putative Nadh-Flavin Reductase, From Streptococcus Pneumoniae TIGR4


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of SP1627, A Putative Nadh-Flavin Reductase, From Streptococcus Pneumoniae TIGR4 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl303

b:61.3
occ:1.00
N B:GLU169 3.6 39.1 1.0
O B:HOH445 3.6 37.3 1.0
CG1 B:ILE170 3.7 52.4 1.0
CA B:GLY168 3.9 38.4 1.0
N B:ILE170 4.2 41.2 1.0
C B:GLY168 4.2 38.3 1.0
N B:GLY168 4.5 40.6 1.0
NZ B:LYS109 4.5 59.9 1.0
CA B:GLU169 4.5 37.3 1.0
CD1 B:ILE170 4.6 54.5 1.0
CB B:ILE170 4.6 47.2 1.0
CB B:GLU169 4.7 39.5 1.0
CE B:LYS109 4.7 58.9 1.0
C B:GLU169 4.8 38.9 1.0

Chlorine binding site 4 out of 4 in 4r01

Go back to Chlorine Binding Sites List in 4r01
Chlorine binding site 4 out of 4 in the Crystal Structure of SP1627, A Putative Nadh-Flavin Reductase, From Streptococcus Pneumoniae TIGR4


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of SP1627, A Putative Nadh-Flavin Reductase, From Streptococcus Pneumoniae TIGR4 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl304

b:81.2
occ:1.00
N B:GLU34 3.6 67.9 1.0
CB B:SER33 3.7 65.8 1.0
CA B:SER33 3.8 63.0 1.0
C B:SER33 4.1 66.3 1.0
CB B:GLU34 4.5 74.2 1.0
CA B:GLU34 4.5 67.0 1.0
NZ B:LYS44 4.8 71.0 1.0

Reference:

P.J.Stogios, O.Onopriyenko, A.Savchenko, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid). Crystal Structure of SP1627, A Putative Nadh-Flavin Reductase, From Streptococcus Pneumoniae TIGR4 To Be Published.
Page generated: Sat Dec 12 11:10:27 2020

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