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Chlorine in PDB 4r8t: Structure of Jev Protease

Protein crystallography data

The structure of Structure of Jev Protease, PDB code: 4r8t was solved by D.T.Nair, T.Weinert, M.Wang, V.Oligeric, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.13 / 2.13
Space group P 62
Cell size a, b, c (Å), α, β, γ (°) 88.260, 88.260, 36.220, 90.00, 90.00, 120.00
R / Rfree (%) 16.4 / 21.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Jev Protease (pdb code 4r8t). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of Jev Protease, PDB code: 4r8t:

Chlorine binding site 1 out of 1 in 4r8t

Go back to Chlorine Binding Sites List in 4r8t
Chlorine binding site 1 out of 1 in the Structure of Jev Protease


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Jev Protease within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl201

b:22.4
occ:1.00
H B:GLY151 2.4 13.7 1.0
H B:VAL126 2.5 31.7 1.0
O B:HOH321 2.9 33.9 1.0
HA2 B:GLY153 2.9 27.9 1.0
H B:GLY153 2.9 37.8 1.0
HB B:VAL126 3.1 28.3 1.0
HA B:TYR150 3.1 11.9 1.0
N B:GLY151 3.2 11.4 1.0
HG23 B:VAL126 3.3 42.1 1.0
N B:GLY153 3.4 31.5 1.0
N B:VAL126 3.4 26.4 1.0
H B:ASN152 3.5 14.6 1.0
HA B:ALA125 3.5 26.4 1.0
CA B:GLY153 3.5 23.2 1.0
HD1 B:TYR150 3.6 23.9 1.0
HD11 B:ILE139 3.6 12.9 1.0
CB B:VAL126 3.8 23.6 1.0
CG2 B:VAL126 3.9 35.1 1.0
N B:ASN152 3.9 12.2 1.0
HA3 B:GLY153 4.0 27.9 1.0
HA2 B:GLY151 4.0 30.3 1.0
CA B:TYR150 4.0 9.9 1.0
HB1 B:ALA125 4.0 41.8 1.0
CA B:GLY151 4.0 25.2 1.0
CD1 B:TYR150 4.1 19.9 1.0
HG21 B:VAL126 4.1 42.1 1.0
C B:TYR150 4.1 11.1 1.0
CA B:VAL126 4.2 32.0 1.0
CA B:ALA125 4.2 22.0 1.0
C B:GLY151 4.3 11.3 1.0
O B:LEU149 4.3 9.9 1.0
C B:ALA125 4.3 22.9 1.0
C B:ASN152 4.3 21.6 1.0
CD1 B:ILE139 4.4 10.7 1.0
HD13 B:ILE139 4.5 12.9 1.0
O B:VAL126 4.6 27.7 1.0
CB B:ALA125 4.6 34.8 1.0
HE1 B:TYR150 4.6 31.8 1.0
HD12 B:ILE139 4.6 12.9 1.0
CE1 B:TYR150 4.7 26.5 1.0
CA B:ASN152 4.8 11.3 1.0
HG22 B:VAL126 4.8 42.1 1.0
CG B:TYR150 4.8 11.0 1.0
C B:GLY153 4.8 15.0 1.0
HB2 B:ALA125 4.9 41.8 1.0
CB B:TYR150 4.9 10.1 1.0
C B:VAL126 4.9 33.7 1.0
N B:TYR150 4.9 9.5 1.0
HA3 B:GLY151 4.9 30.3 1.0
HA B:VAL126 5.0 38.5 1.0
C B:LEU149 5.0 9.5 1.0

Reference:

T.Weinert, V.Olieric, S.Waltersperger, E.Panepucci, L.Chen, H.Zhang, D.Zhou, J.Rose, A.Ebihara, S.Kuramitsu, D.Li, N.Howe, G.Schnapp, A.Pautsch, K.Bargsten, A.E.Prota, P.Surana, J.Kottur, D.T.Nair, F.Basilico, V.Cecatiello, S.Pasqualato, A.Boland, O.Weichenrieder, B.-C.Wang, M.O.Steinmetz, M.Caffrey, M.Wang. Fast Native-Sad Phasing For Routine Macromolecular Structure Determination Nat.Methods 2014.
ISSN: ESSN 1548-7105
DOI: 10.1038/NMETH.3211
Page generated: Fri Jul 26 01:10:17 2024

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