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Chlorine in PDB 4ram: Crystal Structure of New Delhi Metallo-Beta-Lactamase-1 Mutant M67V Complexed with Hydrolyzed Penicillin G

Enzymatic activity of Crystal Structure of New Delhi Metallo-Beta-Lactamase-1 Mutant M67V Complexed with Hydrolyzed Penicillin G

All present enzymatic activity of Crystal Structure of New Delhi Metallo-Beta-Lactamase-1 Mutant M67V Complexed with Hydrolyzed Penicillin G:
3.5.2.6;

Protein crystallography data

The structure of Crystal Structure of New Delhi Metallo-Beta-Lactamase-1 Mutant M67V Complexed with Hydrolyzed Penicillin G, PDB code: 4ram was solved by Y.Kim, C.Tesar, R.Jedrzejczak, G.Babnigg, J.Sacchettini, A.Joachimiak, Midwest Center For Structural Genomics (Mcsg), Structures Of Mtbproteins Conferring Susceptibility To Known Mtb Inhibitors (Mtbi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.97 / 1.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 39.065, 79.212, 133.307, 90.00, 90.00, 90.00
R / Rfree (%) 14.3 / 18

Other elements in 4ram:

The structure of Crystal Structure of New Delhi Metallo-Beta-Lactamase-1 Mutant M67V Complexed with Hydrolyzed Penicillin G also contains other interesting chemical elements:

Zinc (Zn) 7 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of New Delhi Metallo-Beta-Lactamase-1 Mutant M67V Complexed with Hydrolyzed Penicillin G (pdb code 4ram). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of New Delhi Metallo-Beta-Lactamase-1 Mutant M67V Complexed with Hydrolyzed Penicillin G, PDB code: 4ram:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4ram

Go back to Chlorine Binding Sites List in 4ram
Chlorine binding site 1 out of 2 in the Crystal Structure of New Delhi Metallo-Beta-Lactamase-1 Mutant M67V Complexed with Hydrolyzed Penicillin G


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of New Delhi Metallo-Beta-Lactamase-1 Mutant M67V Complexed with Hydrolyzed Penicillin G within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl305

b:31.8
occ:1.00
ZN A:ZN303 2.4 12.5 1.0
O A:HOH533 3.3 31.9 1.0
OE2 A:GLU152 3.5 17.6 1.0
OE2 B:GLU227 3.6 20.2 0.9
OD1 A:ASP223 3.7 14.8 0.8
OD2 A:ASP223 3.7 14.9 1.0
CG A:ASP223 4.1 14.7 1.0
OE1 B:GLU227 4.2 19.0 0.9
CD B:GLU227 4.2 18.6 0.9
O A:HOH402 4.3 25.6 1.0
O A:HOH516 4.4 46.2 1.0
CD A:GLU152 4.4 16.5 1.0
OE1 A:GLU152 4.4 17.7 1.0
NE2 A:HIS122 4.5 12.9 1.0
CD2 A:HIS122 5.0 12.0 1.0

Chlorine binding site 2 out of 2 in 4ram

Go back to Chlorine Binding Sites List in 4ram
Chlorine binding site 2 out of 2 in the Crystal Structure of New Delhi Metallo-Beta-Lactamase-1 Mutant M67V Complexed with Hydrolyzed Penicillin G


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of New Delhi Metallo-Beta-Lactamase-1 Mutant M67V Complexed with Hydrolyzed Penicillin G within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl306

b:35.0
occ:1.00
ZN B:ZN303 2.3 11.2 1.0
O B:HOH545 3.3 35.1 1.0
OE2 B:GLU152 3.6 14.6 1.0
OE2 A:GLU227 3.6 18.0 1.0
OD1 B:ASP223 3.6 13.8 0.7
OD2 B:ASP223 3.6 14.2 1.0
CG B:ASP223 4.0 13.9 1.0
OE1 A:GLU227 4.1 17.3 1.0
CD A:GLU227 4.2 16.7 1.0
O B:HOH402 4.3 26.1 1.0
OE1 B:GLU152 4.4 16.4 1.0
CD B:GLU152 4.4 14.6 1.0
NE2 B:HIS122 4.6 12.5 1.0

Reference:

Y.Kim, C.Tesar, R.Jedrzejczak, G.Babnigg, J.Sacchettini, A.Joachimiak, Midwest Center For Structural Genomics (Mcsg), Structures Of Mtb Proteins Conferring Susceptibility Toknown Mtb Inhibitors (Mtbi). Crystal Structure of New Delhi Metallo-Beta-Lactamase-1 Mutant M67V Complexed with Hydrolyzed Penicillin G To Be Published.
Page generated: Fri Jul 26 01:11:25 2024

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