Atomistry » Chlorine » PDB 4r69-4rj7 » 4rgh
Atomistry »
  Chlorine »
    PDB 4r69-4rj7 »
      4rgh »

Chlorine in PDB 4rgh: Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role

Protein crystallography data

The structure of Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role, PDB code: 4rgh was solved by J.Brynda, K.Grantz Saskova, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.44 / 1.90
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 66.870, 86.400, 52.120, 90.00, 90.00, 90.00
R / Rfree (%) 20.8 / 25.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role (pdb code 4rgh). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role, PDB code: 4rgh:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4rgh

Go back to Chlorine Binding Sites List in 4rgh
Chlorine binding site 1 out of 2 in the Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:44.3
occ:1.00
NE A:ARG261 2.9 23.9 1.0
ND1 A:HIS263 2.9 19.6 1.0
NH2 A:ARG261 3.5 23.1 1.0
CZ A:ARG261 3.6 23.6 1.0
CE1 A:HIS263 3.7 20.2 1.0
CG A:ARG261 3.8 24.6 1.0
CD A:ARG261 3.9 24.0 1.0
CG A:HIS263 4.0 19.9 1.0
CA A:HIS263 4.1 21.2 1.0
OG A:SER277 4.2 24.8 1.0
CB A:SER277 4.2 22.5 1.0
CB A:HIS263 4.3 21.3 1.0
CH2 A:TRP246 4.6 34.4 1.0
O A:HIS263 4.7 21.2 1.0
O A:VAL262 4.7 19.6 1.0
CZ2 A:TRP246 4.7 32.9 1.0
N A:HIS263 4.9 21.6 1.0
C A:HIS263 4.9 22.4 1.0
NH1 A:ARG261 4.9 22.2 1.0
NE2 A:HIS263 4.9 22.1 1.0
CZ3 A:TRP246 5.0 33.0 1.0

Chlorine binding site 2 out of 2 in 4rgh

Go back to Chlorine Binding Sites List in 4rgh
Chlorine binding site 2 out of 2 in the Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl401

b:24.9
occ:1.00
NH1 B:ARG235 3.1 22.9 1.0
ND1 B:HIS213 3.1 20.0 1.0
CG B:ARG235 3.7 21.4 1.0
CD B:ARG235 3.8 21.0 1.0
CB B:HIS213 3.9 21.1 1.0
CG B:HIS213 3.9 20.3 1.0
CD B:PRO214 4.1 19.8 1.0
CE1 B:HIS213 4.2 18.9 1.0
CZ B:ARG235 4.2 22.2 1.0
CA B:HIS213 4.4 18.9 1.0
NE B:ARG235 4.5 22.8 1.0
O B:ARG235 4.6 21.7 1.0
CG B:PRO214 4.7 20.0 1.0
N B:PRO214 4.8 18.8 1.0
C B:HIS213 5.0 19.1 1.0

Reference:

M.Siva, M.Svoboda, V.Veverka, J.Brynda, J.-F.Trempe, M.Kozisek, I.Fleisigova, J.Belza, J.Konvalinka, K.Grantz Saskova. Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role To Be Published.
Page generated: Fri Jul 26 01:14:07 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy