Atomistry » Chlorine » PDB 4r6c-4rjd » 4rgh
Atomistry »
  Chlorine »
    PDB 4r6c-4rjd »
      4rgh »

Chlorine in PDB 4rgh: Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role

Protein crystallography data

The structure of Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role, PDB code: 4rgh was solved by J.Brynda, K.Grantz Saskova, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.44 / 1.90
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 66.870, 86.400, 52.120, 90.00, 90.00, 90.00
R / Rfree (%) 20.8 / 25.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role (pdb code 4rgh). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role, PDB code: 4rgh:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4rgh

Go back to Chlorine Binding Sites List in 4rgh
Chlorine binding site 1 out of 2 in the Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:44.3
occ:1.00
NE A:ARG261 2.9 23.9 1.0
ND1 A:HIS263 2.9 19.6 1.0
NH2 A:ARG261 3.5 23.1 1.0
CZ A:ARG261 3.6 23.6 1.0
CE1 A:HIS263 3.7 20.2 1.0
CG A:ARG261 3.8 24.6 1.0
CD A:ARG261 3.9 24.0 1.0
CG A:HIS263 4.0 19.9 1.0
CA A:HIS263 4.1 21.2 1.0
OG A:SER277 4.2 24.8 1.0
CB A:SER277 4.2 22.5 1.0
CB A:HIS263 4.3 21.3 1.0
CH2 A:TRP246 4.6 34.4 1.0
O A:HIS263 4.7 21.2 1.0
O A:VAL262 4.7 19.6 1.0
CZ2 A:TRP246 4.7 32.9 1.0
N A:HIS263 4.9 21.6 1.0
C A:HIS263 4.9 22.4 1.0
NH1 A:ARG261 4.9 22.2 1.0
NE2 A:HIS263 4.9 22.1 1.0
CZ3 A:TRP246 5.0 33.0 1.0

Chlorine binding site 2 out of 2 in 4rgh

Go back to Chlorine Binding Sites List in 4rgh
Chlorine binding site 2 out of 2 in the Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl401

b:24.9
occ:1.00
NH1 B:ARG235 3.1 22.9 1.0
ND1 B:HIS213 3.1 20.0 1.0
CG B:ARG235 3.7 21.4 1.0
CD B:ARG235 3.8 21.0 1.0
CB B:HIS213 3.9 21.1 1.0
CG B:HIS213 3.9 20.3 1.0
CD B:PRO214 4.1 19.8 1.0
CE1 B:HIS213 4.2 18.9 1.0
CZ B:ARG235 4.2 22.2 1.0
CA B:HIS213 4.4 18.9 1.0
NE B:ARG235 4.5 22.8 1.0
O B:ARG235 4.6 21.7 1.0
CG B:PRO214 4.7 20.0 1.0
N B:PRO214 4.8 18.8 1.0
C B:HIS213 5.0 19.1 1.0

Reference:

M.Siva, M.Svoboda, V.Veverka, J.Brynda, J.-F.Trempe, M.Kozisek, I.Fleisigova, J.Belza, J.Konvalinka, K.Grantz Saskova. Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role To Be Published.
Page generated: Fri Jul 26 01:14:07 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy