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Chlorine in PDB 4rjz: Crystal Structure of ATU4361 Sugar Transporter From Agrobacterium Fabrum C58, Target Efi-510558, An Open Conformation

Protein crystallography data

The structure of Crystal Structure of ATU4361 Sugar Transporter From Agrobacterium Fabrum C58, Target Efi-510558, An Open Conformation, PDB code: 4rjz was solved by Y.Patskovsky, R.Toro, R.Bhosle, N.Al Obaidi, S.Chamala, J.D.Attonito, A.Scott Glenn, S.Chowdhury, J.Lafleur, R.D.Siedel, B.Hillerich, J.Love, K.L.Whalen, J.A.Gerlt, S.C.Almo, Enzyme Function Initiative (Efi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.57 / 1.17
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 123.617, 41.263, 70.442, 90.00, 90.00, 90.00
R / Rfree (%) 12.9 / 16.5

Other elements in 4rjz:

The structure of Crystal Structure of ATU4361 Sugar Transporter From Agrobacterium Fabrum C58, Target Efi-510558, An Open Conformation also contains other interesting chemical elements:

Potassium (K) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of ATU4361 Sugar Transporter From Agrobacterium Fabrum C58, Target Efi-510558, An Open Conformation (pdb code 4rjz). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of ATU4361 Sugar Transporter From Agrobacterium Fabrum C58, Target Efi-510558, An Open Conformation, PDB code: 4rjz:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4rjz

Go back to Chlorine Binding Sites List in 4rjz
Chlorine binding site 1 out of 2 in the Crystal Structure of ATU4361 Sugar Transporter From Agrobacterium Fabrum C58, Target Efi-510558, An Open Conformation


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of ATU4361 Sugar Transporter From Agrobacterium Fabrum C58, Target Efi-510558, An Open Conformation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:20.5
occ:0.60
CL A:CL502 0.0 20.5 0.6
HA2 A:GLY80 2.7 23.4 1.0
CL A:CL502 2.7 23.5 0.4
H A:ALA82 2.9 22.5 1.0
HB3 A:ALA82 3.1 23.6 1.0
HB2 A:LYS306 3.4 25.9 1.0
HA A:TYR77 3.4 24.4 1.0
O A:HOH960 3.4 32.8 1.0
CA A:GLY80 3.4 19.5 1.0
C A:GLY80 3.5 19.2 1.0
HD1 A:TYR77 3.5 24.5 1.0
N A:ALA82 3.7 18.8 1.0
O A:GLY80 3.8 22.9 1.0
CB A:ALA82 3.8 19.6 1.0
N A:ASN81 3.8 19.3 1.0
HB2 A:ALA82 3.8 23.6 1.0
H A:ASN81 3.9 23.2 1.0
H A:GLY80 3.9 24.8 1.0
O A:TYR77 4.0 23.4 1.0
CD1 A:TYR77 4.1 20.4 1.0
HA3 A:GLY80 4.1 23.4 1.0
N A:GLY80 4.2 20.6 1.0
CB A:LYS306 4.3 21.6 1.0
CA A:TYR77 4.3 20.3 1.0
CA A:ALA82 4.3 19.6 1.0
HE1 A:TYR77 4.4 23.4 1.0
O A:HOH977 4.4 28.2 1.0
CE1 A:TYR77 4.5 19.5 1.0
O A:ALA76 4.5 21.3 1.0
HG2 A:LYS306 4.6 31.9 1.0
HG3 A:LYS306 4.6 31.9 1.0
C A:TYR77 4.6 21.7 1.0
HB1 A:ALA82 4.6 23.6 1.0
HB3 A:LYS306 4.6 25.9 1.0
C A:ASN81 4.6 20.3 1.0
O A:ALA82 4.7 20.9 1.0
HB3 A:PHE304 4.7 20.1 1.0
CA A:ASN81 4.7 19.8 1.0
CG A:LYS306 4.7 26.6 1.0
H A:LYS306 4.8 21.0 1.0
CG A:TYR77 4.9 20.2 1.0
HA A:ASN81 4.9 23.7 1.0
C A:ALA82 4.9 19.3 1.0

Chlorine binding site 2 out of 2 in 4rjz

Go back to Chlorine Binding Sites List in 4rjz
Chlorine binding site 2 out of 2 in the Crystal Structure of ATU4361 Sugar Transporter From Agrobacterium Fabrum C58, Target Efi-510558, An Open Conformation


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of ATU4361 Sugar Transporter From Agrobacterium Fabrum C58, Target Efi-510558, An Open Conformation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:23.5
occ:0.40
CL A:CL502 0.0 23.5 0.4
H A:LYS306 2.4 21.0 1.0
HB2 A:LYS306 2.5 25.9 1.0
HB3 A:PHE304 2.5 20.1 1.0
CL A:CL502 2.7 20.5 0.6
HD1 A:TYR77 3.1 24.5 1.0
N A:LYS306 3.2 17.5 1.0
HB3 A:ALA82 3.2 23.6 1.0
HE1 A:TYR77 3.2 23.4 1.0
CB A:LYS306 3.3 21.6 1.0
CB A:PHE304 3.4 16.7 1.0
HG2 A:LYS306 3.5 31.9 1.0
CA A:LYS306 3.6 19.4 1.0
HB2 A:PHE304 3.6 20.1 1.0
CD1 A:TYR77 3.8 20.4 1.0
C A:LYS306 3.8 18.6 1.0
CE1 A:TYR77 3.8 19.5 1.0
H A:THR307 3.8 22.1 1.0
H A:SER305 3.9 18.8 1.0
CG A:LYS306 3.9 26.6 1.0
N A:SER305 3.9 15.7 1.0
C A:PHE304 3.9 16.2 1.0
N A:THR307 4.0 18.4 1.0
HB3 A:LYS306 4.0 25.9 1.0
CB A:ALA82 4.1 19.6 1.0
HD1 A:PHE304 4.1 21.2 1.0
CA A:PHE304 4.3 15.6 1.0
CG A:PHE304 4.3 17.2 1.0
HG3 A:LYS306 4.3 31.9 1.0
C A:SER305 4.3 17.5 1.0
O A:PHE304 4.3 17.4 1.0
HB2 A:ALA82 4.4 23.6 1.0
HB1 A:ALA82 4.4 23.6 1.0
O A:LYS306 4.5 20.5 1.0
HA A:LYS306 4.5 23.3 1.0
CD1 A:PHE304 4.5 17.7 1.0
H A:ALA82 4.6 22.5 1.0
HA A:TYR77 4.7 24.4 1.0
CA A:SER305 4.7 16.2 1.0
HA A:PHE304 4.7 18.7 1.0
HA A:THR307 4.8 21.2 1.0
O A:HOH960 4.8 32.8 1.0
OG A:SER305 4.8 18.9 1.0
O A:PRO83 4.9 18.2 1.0
CA A:THR307 5.0 17.6 1.0

Reference:

Y.Patskovsky, R.Toro, R.Bhosle, N.Al Obaidi, S.Chamala, A.Scott Glenn, J.D.Attonito, S.Chowdhury, J.Lafleur, R.D.Siedel, B.Hillerich, J.Love, K.L.Whalen, J.A.Gerlt, S.C.Almo, Enzyme Function Initiative (Efi). Crystal Structure of Maltoside Transporter ATU4361 From Agrobacterium Fabrum, Target Efi-510558 To Be Published.
Page generated: Sat Dec 12 11:11:36 2020

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