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Chlorine in PDB 4s0w: Wild Type T4 Lysozyme Structure

Enzymatic activity of Wild Type T4 Lysozyme Structure

All present enzymatic activity of Wild Type T4 Lysozyme Structure:
3.2.1.17;

Protein crystallography data

The structure of Wild Type T4 Lysozyme Structure, PDB code: 4s0w was solved by E.H.Snell, M.E.Snell, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.60 / 2.12
Space group P 31
Cell size a, b, c (Å), α, β, γ (°) 52.630, 52.630, 99.460, 90.00, 90.00, 120.00
R / Rfree (%) 17 / 21.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Wild Type T4 Lysozyme Structure (pdb code 4s0w). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Wild Type T4 Lysozyme Structure, PDB code: 4s0w:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 4s0w

Go back to Chlorine Binding Sites List in 4s0w
Chlorine binding site 1 out of 3 in the Wild Type T4 Lysozyme Structure


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Wild Type T4 Lysozyme Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl205

b:10.1
occ:1.00
HG A:SER36 2.2 10.8 1.0
HG B:SER117 2.2 13.4 1.0
H B:SER117 2.7 12.1 1.0
OG B:SER117 2.9 11.2 1.0
HA A:SER36 3.0 11.2 1.0
OG A:SER36 3.0 9.0 1.0
HB3 B:ASN132 3.1 19.5 1.0
HB3 B:PHE114 3.1 11.0 1.0
HD1 B:PHE114 3.2 12.7 1.0
HA B:PHE114 3.2 11.0 1.0
HB2 B:SER117 3.2 11.6 1.0
O B:HOH312 3.2 12.3 1.0
HB3 A:SER36 3.3 11.3 1.0
HB3 B:ASN116 3.4 13.7 1.0
HD2 A:PRO37 3.4 15.2 1.0
CB A:SER36 3.5 9.4 1.0
N B:SER117 3.5 10.1 1.0
CB B:SER117 3.5 9.7 1.0
CA A:SER36 3.7 9.3 1.0
H B:ASN116 3.7 11.4 1.0
CA B:PHE114 3.8 9.2 1.0
CB B:PHE114 3.8 9.2 1.0
CD1 B:PHE114 3.9 10.6 1.0
C B:PHE114 3.9 8.9 1.0
CB B:ASN132 4.0 16.2 1.0
O B:PHE114 4.0 8.4 1.0
HD23 B:LEU133 4.1 12.6 1.0
HD3 A:PRO37 4.1 15.2 1.0
CA B:SER117 4.1 10.3 1.0
CD A:PRO37 4.2 12.7 1.0
HB2 B:ASN132 4.2 19.5 1.0
CB B:ASN116 4.2 11.4 1.0
CG B:PHE114 4.3 10.2 1.0
N B:ASN116 4.3 9.5 1.0
HB3 B:SER117 4.4 11.6 1.0
N A:SER36 4.4 8.4 1.0
HB2 A:SER36 4.4 11.3 1.0
OD1 B:ASN132 4.5 22.6 1.0
C B:ASN116 4.5 10.2 1.0
HB2 B:ASN116 4.5 13.7 1.0
O B:ASN132 4.5 13.8 1.0
CA B:ASN116 4.6 10.3 1.0
N B:THR115 4.6 9.3 1.0
HA B:SER117 4.6 12.3 1.0
HB2 B:PHE114 4.6 11.0 1.0
C B:ASN132 4.6 13.3 1.0
HD21 B:LEU133 4.7 12.6 1.0
H A:SER36 4.7 10.1 1.0
HA B:LEU133 4.7 15.3 1.0
CG B:ASN132 4.7 21.2 1.0
H B:THR115 4.7 11.2 1.0
CD2 B:LEU133 4.8 10.5 1.0
HG B:LEU133 4.8 13.8 1.0
C A:SER36 4.9 10.1 1.0
N A:PRO37 4.9 11.1 1.0
CE1 B:PHE114 4.9 11.3 1.0
HD22 B:ASN116 4.9 18.7 1.0
CA B:ASN132 5.0 14.6 1.0
C A:LYS35 5.0 9.3 1.0

Chlorine binding site 2 out of 3 in 4s0w

Go back to Chlorine Binding Sites List in 4s0w
Chlorine binding site 2 out of 3 in the Wild Type T4 Lysozyme Structure


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Wild Type T4 Lysozyme Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl206

b:9.6
occ:1.00
HG A:SER117 2.1 9.6 1.0
HG B:SER36 2.1 11.2 1.0
H A:SER117 2.7 11.0 1.0
OG A:SER117 2.8 8.0 1.0
OG B:SER36 2.9 9.3 1.0
O A:HOH307 3.1 8.5 1.0
HA B:SER36 3.1 12.8 1.0
HB3 A:PHE114 3.1 10.1 1.0
HB2 A:SER117 3.2 9.8 1.0
O A:HOH464 3.3 12.5 1.0
HA A:PHE114 3.3 10.4 1.0
HD1 A:PHE114 3.3 10.0 1.0
HB3 A:ASN116 3.4 11.4 1.0
HB3 A:ASN132 3.4 10.4 1.0
CB A:SER117 3.5 8.2 1.0
HB3 B:SER36 3.5 11.7 1.0
N A:SER117 3.5 9.2 1.0
CB B:SER36 3.6 9.8 1.0
HD2 B:PRO37 3.6 14.5 1.0
CA B:SER36 3.8 10.7 1.0
H A:ASN116 3.8 10.4 1.0
CB A:PHE114 3.8 8.4 1.0
CA A:PHE114 3.9 8.7 1.0
HD23 A:LEU133 4.0 9.2 1.0
C A:PHE114 4.1 8.5 1.0
CA A:SER117 4.1 9.2 1.0
CD1 A:PHE114 4.1 8.3 1.0
O A:PHE114 4.2 8.4 1.0
CB A:ASN116 4.2 9.5 1.0
N A:ASN116 4.3 8.6 1.0
HD3 B:PRO37 4.3 14.5 1.0
HB3 A:SER117 4.3 9.8 1.0
CD B:PRO37 4.4 12.1 1.0
CB A:ASN132 4.4 8.7 1.0
CG A:PHE114 4.4 9.1 1.0
C A:ASN116 4.4 9.7 1.0
HB2 A:ASN116 4.4 11.4 1.0
N B:SER36 4.5 10.6 1.0
HB2 B:SER36 4.5 11.7 1.0
HA A:SER117 4.5 11.0 1.0
CA A:ASN116 4.5 9.4 1.0
O A:ASN132 4.6 9.1 1.0
HB2 A:ASN132 4.6 10.4 1.0
HA A:LEU133 4.6 9.4 1.0
HB2 A:PHE114 4.6 10.1 1.0
N A:THR115 4.7 9.4 1.0
H B:SER36 4.7 12.7 1.0
C A:ASN132 4.7 8.7 1.0
HD21 A:LEU133 4.8 9.2 1.0
H A:THR115 4.8 11.3 1.0
CD2 A:LEU133 4.8 7.7 1.0
C B:SER36 5.0 11.7 1.0
H A:LEU118 5.0 11.3 1.0

Chlorine binding site 3 out of 3 in 4s0w

Go back to Chlorine Binding Sites List in 4s0w
Chlorine binding site 3 out of 3 in the Wild Type T4 Lysozyme Structure


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Wild Type T4 Lysozyme Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl203

b:12.3
occ:1.00
HZ1 A:LYS35 2.5 14.8 1.0
H B:TRP138 2.6 19.0 1.0
HZ B:PHE114 2.7 13.8 1.0
HB3 B:ARG137 3.0 28.1 1.0
O A:HOH312 3.1 12.8 1.0
HB2 B:TRP138 3.2 16.0 1.0
HB2 B:SER136 3.2 15.3 1.0
N B:TRP138 3.4 15.8 1.0
H B:ARG137 3.4 21.0 1.0
NZ A:LYS35 3.4 12.3 1.0
CZ B:PHE114 3.4 11.5 1.0
HB3 B:TRP138 3.5 16.0 1.0
HE1 B:PHE114 3.5 13.5 1.0
HZ3 A:LYS35 3.7 14.8 1.0
CB B:TRP138 3.7 13.3 1.0
HD2 A:LYS35 3.8 15.3 1.0
N B:ARG137 3.9 17.5 1.0
HZ2 A:LYS35 3.9 14.8 1.0
CE1 B:PHE114 3.9 11.3 1.0
HH A:TYR24 3.9 23.5 1.0
CB B:ARG137 3.9 23.5 1.0
CA B:TRP138 4.1 14.7 1.0
HE3 A:LYS35 4.1 15.1 1.0
CB B:SER136 4.2 12.7 1.0
OH A:TYR24 4.2 19.6 1.0
CE A:LYS35 4.2 12.6 1.0
C B:ARG137 4.2 17.1 1.0
CA B:ARG137 4.2 18.7 1.0
HA B:TRP138 4.3 17.6 1.0
HE1 B:MET106 4.4 14.7 1.0
HB2 B:ARG137 4.5 28.1 1.0
CD A:LYS35 4.5 12.8 1.0
HD3 B:ARG137 4.5 46.4 1.0
CE2 B:PHE114 4.5 10.3 1.0
OG B:SER136 4.7 12.4 1.0
HB3 B:SER136 4.7 15.3 1.0
C B:SER136 4.7 16.6 1.0
HE2 B:PHE114 4.7 12.4 1.0
HG2 B:ARG137 4.7 34.1 1.0
HA B:SER136 4.8 17.3 1.0
CA B:SER136 4.8 14.4 1.0
CG B:ARG137 4.9 28.4 1.0
HD3 A:LYS35 4.9 15.3 1.0

Reference:

E.H.Snell, M.E.Snell. Wild Type T4 Lysozyme Structure To Be Published.
Page generated: Fri Jul 26 01:39:30 2024

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