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Chlorine in PDB 4u0d: Hexameric Hiv-1 Ca in Complex with NUP153 Peptide, P212121 Crystal Form

Protein crystallography data

The structure of Hexameric Hiv-1 Ca in Complex with NUP153 Peptide, P212121 Crystal Form, PDB code: 4u0d was solved by A.J.Price, D.A.Jacques, L.C.James, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 115.67 / 3.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 135.380, 138.060, 211.850, 90.00, 90.00, 90.00
R / Rfree (%) 24.6 / 26.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Hexameric Hiv-1 Ca in Complex with NUP153 Peptide, P212121 Crystal Form (pdb code 4u0d). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Hexameric Hiv-1 Ca in Complex with NUP153 Peptide, P212121 Crystal Form, PDB code: 4u0d:

Chlorine binding site 1 out of 1 in 4u0d

Go back to Chlorine Binding Sites List in 4u0d
Chlorine binding site 1 out of 1 in the Hexameric Hiv-1 Ca in Complex with NUP153 Peptide, P212121 Crystal Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Hexameric Hiv-1 Ca in Complex with NUP153 Peptide, P212121 Crystal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl301

b:58.4
occ:1.00
OH E:TYR169 3.6 46.1 1.0
OE2 F:GLU71 3.9 59.1 1.0
SD E:MET214 4.0 49.5 1.0
CB E:LEU211 4.3 47.9 1.0
N E:LEU211 4.5 50.1 1.0
CD2 E:LEU190 4.5 56.2 1.0
CA E:LEU211 4.6 49.1 1.0
CD1 E:LEU211 4.6 47.7 1.0
CE E:MET214 4.7 51.7 1.0
CZ E:TYR169 4.9 45.2 1.0
CG E:LEU211 5.0 47.1 1.0
O E:ALA209 5.0 53.4 1.0

Reference:

A.J.Price, D.A.Jacques, W.A.Mcewan, A.J.Fletcher, S.Essig, J.W.Chin, U.D.Halambage, C.Aiken, L.C.James. Host Cofactors and Pharmacologic Ligands Share An Essential Interface in Hiv-1 Capsid That Is Lost Upon Disassembly. Plos Pathog. V. 10 04459 2014.
ISSN: ESSN 1553-7374
PubMed: 25356722
DOI: 10.1371/JOURNAL.PPAT.1004459
Page generated: Fri Jul 26 02:01:22 2024

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