Atomistry » Chlorine » PDB 4tsq-4u1a » 4u18
Atomistry »
  Chlorine »
    PDB 4tsq-4u1a »
      4u18 »

Chlorine in PDB 4u18: Crystal Structure of Human Peroxisomal DELTA3,DELTA2, Enoyl-Coa Isomerase (Iso-ECI2)

Enzymatic activity of Crystal Structure of Human Peroxisomal DELTA3,DELTA2, Enoyl-Coa Isomerase (Iso-ECI2)

All present enzymatic activity of Crystal Structure of Human Peroxisomal DELTA3,DELTA2, Enoyl-Coa Isomerase (Iso-ECI2):
5.3.3.8;

Protein crystallography data

The structure of Crystal Structure of Human Peroxisomal DELTA3,DELTA2, Enoyl-Coa Isomerase (Iso-ECI2), PDB code: 4u18 was solved by G.U.Onwukwe, M.K.Koski, R.K.Wierenga, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 75.12 / 2.64
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 76.428, 91.915, 130.368, 90.00, 90.00, 90.00
R / Rfree (%) 19.4 / 26.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Human Peroxisomal DELTA3,DELTA2, Enoyl-Coa Isomerase (Iso-ECI2) (pdb code 4u18). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Human Peroxisomal DELTA3,DELTA2, Enoyl-Coa Isomerase (Iso-ECI2), PDB code: 4u18:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 4u18

Go back to Chlorine Binding Sites List in 4u18
Chlorine binding site 1 out of 3 in the Crystal Structure of Human Peroxisomal DELTA3,DELTA2, Enoyl-Coa Isomerase (Iso-ECI2)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human Peroxisomal DELTA3,DELTA2, Enoyl-Coa Isomerase (Iso-ECI2) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:85.5
occ:1.00
OD1 A:ASN165 3.7 77.0 1.0
CB A:ASN185 4.1 58.9 1.0
OH A:TYR134 4.1 51.1 1.0
O A:ASN185 4.1 57.1 1.0
CZ A:TYR134 4.2 56.0 1.0
CE2 A:TYR134 4.3 58.1 1.0
CH2 A:TRP340 4.3 65.3 1.0
CG A:ASN185 4.4 59.9 1.0
CZ2 A:TRP340 4.5 66.0 1.0
CG A:ASN165 4.6 69.1 1.0
CA A:ASN185 4.7 57.3 1.0
C A:ASN185 4.7 57.8 1.0
CB A:LEU189 4.8 57.3 1.0
OD1 A:ASN185 4.8 60.8 1.0
ND2 A:ASN185 4.8 60.8 1.0
CE1 A:TYR134 4.9 54.3 1.0

Chlorine binding site 2 out of 3 in 4u18

Go back to Chlorine Binding Sites List in 4u18
Chlorine binding site 2 out of 3 in the Crystal Structure of Human Peroxisomal DELTA3,DELTA2, Enoyl-Coa Isomerase (Iso-ECI2)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Human Peroxisomal DELTA3,DELTA2, Enoyl-Coa Isomerase (Iso-ECI2) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl401

b:0.9
occ:1.00
CB B:ASN185 3.7 0.7 1.0
O B:ASN185 3.7 0.2 1.0
CG B:ASN185 3.9 0.9 1.0
CA B:ASN185 3.9 0.2 1.0
CD2 B:LEU188 3.9 99.5 1.0
OD1 B:ASN185 4.0 0.5 1.0
C B:ASN185 4.2 0.6 1.0
CE2 B:TYR134 4.3 0.7 1.0
OD1 B:ASN165 4.4 89.4 1.0
CZ B:TYR134 4.5 0.1 1.0
ND2 B:ASN185 4.6 0.2 1.0
CG B:LEU188 4.6 96.8 1.0
CD2 B:TYR134 4.6 0.6 1.0
CB B:LEU188 4.6 87.6 1.0
N B:LEU189 4.8 82.7 1.0
OH B:TYR134 4.8 0.7 1.0
CB B:LEU189 4.9 87.8 1.0
CH2 B:TRP340 4.9 96.5 1.0

Chlorine binding site 3 out of 3 in 4u18

Go back to Chlorine Binding Sites List in 4u18
Chlorine binding site 3 out of 3 in the Crystal Structure of Human Peroxisomal DELTA3,DELTA2, Enoyl-Coa Isomerase (Iso-ECI2)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Human Peroxisomal DELTA3,DELTA2, Enoyl-Coa Isomerase (Iso-ECI2) within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl401

b:0.2
occ:1.00
OD1 C:ASN165 4.0 79.5 1.0
CE2 C:TYR134 4.0 63.8 1.0
O C:ASN185 4.0 84.5 1.0
CB C:ASN185 4.0 86.9 1.0
CZ C:TYR134 4.2 71.8 1.0
CG C:ASN185 4.3 84.5 1.0
CA C:ASN185 4.3 79.6 1.0
OH C:TYR134 4.4 72.5 1.0
CD2 C:LEU188 4.5 62.5 1.0
CD2 C:TYR134 4.5 64.8 1.0
OD1 C:ASN185 4.5 81.7 1.0
C C:ASN185 4.5 78.1 1.0
CH2 C:TRP340 4.7 97.6 1.0
ND2 C:ASN185 4.8 81.9 1.0
CB C:LEU189 4.8 56.5 1.0
CE1 C:TYR134 4.8 77.0 1.0
N C:LEU189 5.0 54.9 1.0

Reference:

G.U.Onwukwe, P.Kursula, M.K.Koski, W.Schmitz, R.K.Wierenga. Human Delta 3, DELTA2-Enoyl-Coa Isomerase, Type-2: A Structural Enzymology Study on the Catalytic Role of Its Acbp-Domain and Helix-10. Febs J. 2014.
ISSN: ISSN 1742-464X
DOI: 10.1111/FEBS.13179
Page generated: Fri Jul 26 02:02:58 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy