Chlorine in PDB 4uf7: Ghanaian Henipavirus (Gh-M74A) Attachment Glycoprotein in Complex with Human EPHRINB2

The structure of Ghanaian Henipavirus (Gh-M74A) Attachment Glycoprotein in Complex with Human EPHRINB2, PDB code: 4uf7 was solved by B.Lee, O.Pernet, A.A.Ahmed, A.Zeltina, S.M.Beaty, T.A.Bowden, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	111.47 / 1.70
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	127.220, 152.530, 163.300, 90.00, 90.00, 90.00
R / Rfree (%)	17.48 / 19.94

The binding sites of Chlorine atom in the Ghanaian Henipavirus (Gh-M74A) Attachment Glycoprotein in Complex with Human EPHRINB2 (pdb code 4uf7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Ghanaian Henipavirus (Gh-M74A) Attachment Glycoprotein in Complex with Human EPHRINB2, PDB code: 4uf7:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Ghanaian Henipavirus (Gh-M74A) Attachment Glycoprotein in Complex with Human EPHRINB2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Ghanaian Henipavirus (Gh-M74A) Attachment Glycoprotein in Complex with Human EPHRINB2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1628 b:27.6 occ:1.00 N A:GLN416 3.3 22.3 1.0 CD2 A:HIS417 3.4 23.4 1.0 CD A:PRO415 3.5 20.5 1.0 N A:PRO415 3.5 19.7 1.0 NH2 A:ARG381 3.6 28.2 1.0 CA A:SER414 3.7 18.7 1.0 C A:SER414 3.7 18.9 1.0 CB A:GLN416 3.8 26.9 1.0 N A:HIS417 3.8 20.1 1.0 OG A:SER414 3.9 18.2 1.0 CA A:GLN416 3.9 23.7 1.0 CG A:PRO415 4.0 21.2 1.0 C A:GLN416 4.1 21.9 1.0 CG A:HIS417 4.3 21.7 1.0 C A:PRO415 4.3 20.8 1.0 CB A:SER414 4.4 18.1 1.0 CA A:PRO415 4.4 20.1 1.0 CB A:HIS417 4.4 20.7 1.0 CG A:GLN416 4.4 30.2 1.0 NE2 A:HIS417 4.5 24.2 1.0 O A:SER414 4.5 18.6 1.0 O A:GLY413 4.7 18.0 1.0 CZ A:ARG381 4.7 27.2 1.0 CA A:HIS417 4.7 19.6 1.0 N A:SER414 4.8 18.2 1.0 O A:HOH2136 4.8 59.0 1.0 CB A:PRO415 4.9 21.2 1.0 NE A:ARG381 5.0 23.5 1.0

Chlorine binding site 2 out of 2 in the Ghanaian Henipavirus (Gh-M74A) Attachment Glycoprotein in Complex with Human EPHRINB2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Ghanaian Henipavirus (Gh-M74A) Attachment Glycoprotein in Complex with Human EPHRINB2 within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl1626 b:34.8 occ:1.00 N B:GLN416 3.3 30.5 1.0 CD2 B:HIS417 3.4 31.3 1.0 NH2 B:ARG381 3.5 32.8 1.0 CD B:PRO415 3.5 28.2 1.0 N B:PRO415 3.5 27.3 1.0 CA B:SER414 3.7 24.9 1.0 C B:SER414 3.7 25.6 1.0 N B:HIS417 3.9 29.1 1.0 OG B:SER414 3.9 23.5 1.0 CB B:GLN416 3.9 35.2 1.0 CA B:GLN416 3.9 32.7 1.0 CG B:PRO415 4.0 29.1 1.0 C B:GLN416 4.2 31.6 1.0 CG B:HIS417 4.2 30.5 1.0 O B:HOH2115 4.3 76.8 1.0 C B:PRO415 4.3 29.8 1.0 CB B:SER414 4.3 24.4 1.0 CB B:HIS417 4.4 29.1 1.0 CG B:GLN416 4.4 37.1 1.0 CA B:PRO415 4.5 28.1 1.0 NE2 B:HIS417 4.5 32.5 1.0 O B:SER414 4.5 24.8 1.0 O B:GLY413 4.6 23.7 1.0 CZ B:ARG381 4.6 32.7 1.0 CA B:HIS417 4.8 28.8 1.0 N B:SER414 4.8 24.5 1.0 NE B:ARG381 4.9 29.9 1.0 CB B:PRO415 4.9 29.0 1.0

B.Lee, O.Pernet, A.A.Ahmed, A.Zeltina, S.M.Beaty, T.A.Bowden. Molecular Recognition of Human EPHRINB2 Cell Surface Receptor By An Emergent African Henipavirus Proc.Natl.Acad.Sci.Usa 2015.
ISSN: ESSN 1091-6490