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Chlorine in PDB 4uio: Structure of the Salmonella Typhi Type I Dehydroquinase Covalently Inhibited By A 3-Dehydroquinic Acid Derivative

Enzymatic activity of Structure of the Salmonella Typhi Type I Dehydroquinase Covalently Inhibited By A 3-Dehydroquinic Acid Derivative

All present enzymatic activity of Structure of the Salmonella Typhi Type I Dehydroquinase Covalently Inhibited By A 3-Dehydroquinic Acid Derivative:
4.2.1.10;

Protein crystallography data

The structure of Structure of the Salmonella Typhi Type I Dehydroquinase Covalently Inhibited By A 3-Dehydroquinic Acid Derivative, PDB code: 4uio was solved by J.M.Otero, A.L.Llamas-Saiz, L.Tizon, E.Lence, P.Thompson, A.R.Hawkins, C.Gonzalez-Bello, M.J.Van Raaij, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.63 / 1.35
Space group I 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 67.399, 42.327, 84.828, 90.00, 105.13, 90.00
R / Rfree (%) 17.4 / 21.4

Other elements in 4uio:

The structure of Structure of the Salmonella Typhi Type I Dehydroquinase Covalently Inhibited By A 3-Dehydroquinic Acid Derivative also contains other interesting chemical elements:

Sodium (Na) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of the Salmonella Typhi Type I Dehydroquinase Covalently Inhibited By A 3-Dehydroquinic Acid Derivative (pdb code 4uio). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of the Salmonella Typhi Type I Dehydroquinase Covalently Inhibited By A 3-Dehydroquinic Acid Derivative, PDB code: 4uio:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4uio

Go back to Chlorine Binding Sites List in 4uio
Chlorine binding site 1 out of 2 in the Structure of the Salmonella Typhi Type I Dehydroquinase Covalently Inhibited By A 3-Dehydroquinic Acid Derivative


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of the Salmonella Typhi Type I Dehydroquinase Covalently Inhibited By A 3-Dehydroquinic Acid Derivative within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1254

b:10.7
occ:1.00
O A:HOH2137 3.1 29.2 1.0
N A:ASP74 3.3 8.5 1.0
O A:HOH2143 3.3 27.7 1.0
C A:MET72 3.5 6.8 1.0
CA A:MET72 3.5 6.2 0.5
CA A:MET72 3.5 6.0 0.5
N A:PRO73 3.6 7.7 1.0
N A:ILE75 3.7 7.6 1.0
CB A:MET72 3.7 5.7 0.5
CB A:MET72 3.7 6.2 0.5
CD A:PRO73 3.8 8.5 1.0
CB A:ASP74 3.9 10.4 1.0
CA A:ASP74 3.9 8.5 1.0
O A:MET72 4.0 7.0 1.0
C A:ASP74 4.0 8.5 1.0
CG A:MET72 4.1 5.9 0.5
CE A:MET72 4.2 8.0 0.5
C A:PRO73 4.3 8.4 1.0
CB A:ILE75 4.4 6.7 1.0
CA A:PRO73 4.4 7.8 1.0
CA A:ILE75 4.5 6.4 1.0
CG A:MET72 4.5 7.2 0.5
OD2 A:ASP74 4.5 15.1 1.0
CG A:ASP74 4.6 10.7 1.0
N A:MET72 4.8 6.9 1.0
O A:HOH2151 4.9 17.2 1.0
O A:ASP74 5.0 12.2 1.0

Chlorine binding site 2 out of 2 in 4uio

Go back to Chlorine Binding Sites List in 4uio
Chlorine binding site 2 out of 2 in the Structure of the Salmonella Typhi Type I Dehydroquinase Covalently Inhibited By A 3-Dehydroquinic Acid Derivative


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of the Salmonella Typhi Type I Dehydroquinase Covalently Inhibited By A 3-Dehydroquinic Acid Derivative within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1255

b:6.6
occ:1.00
NE2 A:HIS179 2.1 15.5 1.0
CD2 A:HIS179 3.0 14.8 1.0
CE1 A:HIS179 3.1 17.7 1.0
CG A:HIS179 4.2 12.8 1.0
ND1 A:HIS179 4.2 16.1 1.0

Reference:

C.Gonzalez-Bello, L.Tizon, E.Lence, J.M.Otero, M.J.Van Raaij, M.Martinez-Guitian, A.Beceiro, P.Thompson, A.R.Hawkins. Chemical Modification of A Dehydratase Enzyme Involved in Bacterial Virulence By An Ammonium Derivative: Evidence of Its Active Site Covalent Adduct. J.Am.Chem.Soc. V. 137 9333 2015.
ISSN: ISSN 0002-7863
PubMed: 26148116
DOI: 10.1021/JACS.5B04080
Page generated: Sat Dec 12 11:15:46 2020

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