Chlorine in PDB 4uqm: Crystal Structure Determination of Uracil-Dna N-Glycosylase (Ung) From Deinococcus Radiodurans in Complex with Dna - New Insights Into the Role of the Leucine-Loop For Damage Recognition and Repair

Enzymatic activity of Crystal Structure Determination of Uracil-Dna N-Glycosylase (Ung) From Deinococcus Radiodurans in Complex with Dna - New Insights Into the Role of the Leucine-Loop For Damage Recognition and Repair

All present enzymatic activity of Crystal Structure Determination of Uracil-Dna N-Glycosylase (Ung) From Deinococcus Radiodurans in Complex with Dna - New Insights Into the Role of the Leucine-Loop For Damage Recognition and Repair:
3.2.2.27;

Protein crystallography data

The structure of Crystal Structure Determination of Uracil-Dna N-Glycosylase (Ung) From Deinococcus Radiodurans in Complex with Dna - New Insights Into the Role of the Leucine-Loop For Damage Recognition and Repair, PDB code: 4uqm was solved by H.L.Pedersen, K.A.Johnson, C.E.Mcvey, I.Leiros, E.Moe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	27.03 / 1.35
*Space group*	P 2₁ 2₁ 2
*Cell size a, b, c (Å), α, β, γ (°)*	84.300, 98.720, 43.940, 90.00, 90.00, 90.00
*R / R_free (%)*	18.2 / 21.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure Determination of Uracil-Dna N-Glycosylase (Ung) From Deinococcus Radiodurans in Complex with Dna - New Insights Into the Role of the Leucine-Loop For Damage Recognition and Repair (pdb code 4uqm). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure Determination of Uracil-Dna N-Glycosylase (Ung) From Deinococcus Radiodurans in Complex with Dna - New Insights Into the Role of the Leucine-Loop For Damage Recognition and Repair, PDB code: 4uqm:

Chlorine binding site 1 out of 1 in 4uqm

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Chlorine Binding Sites List in 4uqm

Chlorine binding site 1 out of 1 in the Crystal Structure Determination of Uracil-Dna N-Glycosylase (Ung) From Deinococcus Radiodurans in Complex with Dna - New Insights Into the Role of the Leucine-Loop For Damage Recognition and Repair

Mono view

Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure Determination of Uracil-Dna N-Glycosylase (Ung) From Deinococcus Radiodurans in Complex with Dna - New Insights Into the Role of the Leucine-Loop For Damage Recognition and Repair within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Cl1245 b:18.2 occ:1.00	O	B:HOH2004	3.2	20.8	1.0
	O	A:HOH2101	3.3	18.8	1.0
	N	A:PHE96	3.3	14.3	1.0
	N	A:TYR85	3.4	14.7	1.0
	ND2	A:ASN142	3.5	15.2	1.0
	CA	A:PRO84	3.5	13.9	1.0
	O	A:HOH2100	3.6	20.6	1.0
	CA	A:SER95	3.7	14.5	1.0
	CD2	A:TYR85	3.7	15.4	1.0
	C	A:PRO84	3.9	14.6	1.0
	C	A:SER95	4.0	14.4	1.0
	CE2	A:TYR85	4.2	16.1	1.0
	CB	A:PRO84	4.2	14.5	1.0
	CG	A:TYR85	4.2	15.5	1.0
	O	A:LEU94	4.2	16.1	1.0
	CA	A:PHE96	4.2	15.1	1.0
	CB	A:ALA91	4.3	16.0	1.0
	CB	A:SER95	4.4	15.6	1.0
	O	A:ASP83	4.4	14.3	1.0
	CA	A:TYR85	4.5	14.7	1.0
	N	A:SER95	4.6	14.3	1.0
	CB	A:TYR85	4.6	15.9	1.0
	O	A:HOH2135	4.6	17.4	1.0
	CG	A:ASN142	4.6	14.6	1.0
	N	A:PRO84	4.6	13.7	1.0
	C	A:LEU94	4.7	16.1	1.0
	CA	A:ALA91	4.8	15.0	1.0
	CZ	A:TYR85	4.9	17.1	1.0
	OD1	A:ASN142	4.9	15.4	1.0
	C	A:PHE96	4.9	15.0	1.0
	CD1	A:TYR85	4.9	15.4	1.0
	N	A:SER97	4.9	15.2	1.0
	C	A:ASP83	4.9	14.3	1.0

Reference:

H.L.Pedersen, K.A.Johnson, C.E.Mcvey, I.Leiros, E.Moe. Structure Determination of Uracil-Dna N-Glycosylase From Deinococcus Radiodurans in Complex with Dna. Acta Crystallogr. D Biol. V. 71 2137 2015CRYSTALLOGR..
ISSN: ESSN 1399-0047
PubMed: 26457437
DOI: 10.1107/S1399004715014157

Page generated: Fri Jul 26 02:24:58 2024

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