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Chlorine in PDB 4uri: Crystal Structure of Chitinase-Like Agglutinin Robpscra From Robinia Pseudoacacia

Protein crystallography data

The structure of Crystal Structure of Chitinase-Like Agglutinin Robpscra From Robinia Pseudoacacia, PDB code: 4uri was solved by G.Sulzenbacher, V.Roig-Zamboni, W.J.Peumans, B.Henrissat, E.J.M.Van Damme, Y.Bourne, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.48 / 1.85
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 43.100, 53.221, 71.271, 106.01, 94.12, 107.59
R / Rfree (%) 14.838 / 18.731

Other elements in 4uri:

The structure of Crystal Structure of Chitinase-Like Agglutinin Robpscra From Robinia Pseudoacacia also contains other interesting chemical elements:

Sodium (Na) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Chitinase-Like Agglutinin Robpscra From Robinia Pseudoacacia (pdb code 4uri). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Chitinase-Like Agglutinin Robpscra From Robinia Pseudoacacia, PDB code: 4uri:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4uri

Go back to Chlorine Binding Sites List in 4uri
Chlorine binding site 1 out of 2 in the Crystal Structure of Chitinase-Like Agglutinin Robpscra From Robinia Pseudoacacia


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Chitinase-Like Agglutinin Robpscra From Robinia Pseudoacacia within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl504

b:59.7
occ:1.00
OH A:TYR205 3.0 15.1 1.0
O A:HOH2078 3.2 30.8 1.0
OE1 A:GLN198 3.5 18.5 1.0
CD A:ARG207 4.0 25.6 1.0
NE2 A:GLN198 4.1 13.6 1.0
CZ A:TYR205 4.2 14.2 1.0
CD A:GLN198 4.2 14.1 1.0
CE2 A:TYR205 4.6 14.2 1.0
CG A:ARG207 4.7 22.6 1.0
CE1 A:PHE251 4.8 15.8 1.0
CD1 A:TYR193 4.9 22.3 1.0
CE1 A:TYR193 4.9 22.4 1.0
CD1 A:PHE251 5.0 15.7 1.0

Chlorine binding site 2 out of 2 in 4uri

Go back to Chlorine Binding Sites List in 4uri
Chlorine binding site 2 out of 2 in the Crystal Structure of Chitinase-Like Agglutinin Robpscra From Robinia Pseudoacacia


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Chitinase-Like Agglutinin Robpscra From Robinia Pseudoacacia within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl501

b:27.2
occ:1.00
OG1 B:THR195 3.1 24.7 1.0
O B:HOH2103 3.1 18.4 1.0
CA B:TYR193 3.4 20.6 1.0
CB B:THR195 3.4 22.1 1.0
N B:THR195 3.5 19.5 1.0
CD B:PRO194 3.6 22.0 1.0
C B:TYR193 3.6 20.6 1.0
N B:PRO194 3.7 21.0 1.0
CA B:THR195 4.1 20.6 1.0
CB B:TYR193 4.1 20.1 1.0
CD2 B:TYR193 4.3 20.8 1.0
O B:TYR193 4.3 19.0 1.0
O B:SER192 4.3 25.3 1.0
CG B:PRO194 4.5 23.1 1.0
C B:PRO194 4.5 19.6 1.0
N B:TYR193 4.6 21.7 1.0
CG B:TYR193 4.6 19.8 1.0
CA B:PRO194 4.7 21.0 1.0
CG2 B:THR195 4.7 23.1 1.0
N B:LEU196 4.8 17.6 1.0
C B:SER192 4.9 24.6 1.0

Reference:

G.Sulzenbacher, V.Roig-Zamboni, W.J.Peumans, B.Henrissat, E.J.Van Damme, Y.Bourne. Structural Basis For Carbohydrate Binding Properties of A Plant Chitinase-Like Agglutinin with Conserved Catalytic Machinery. J.Struct.Biol. 2015.
ISSN: ESSN 1095-8657
PubMed: 25727185
DOI: 10.1016/J.JSB.2015.01.013
Page generated: Fri Jul 26 02:25:36 2024

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