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Chlorine in PDB 4uwv: Lysozyme Soaked with A Ruthenium Based Corm with A Pyridine Ligand (Complex 8)

Enzymatic activity of Lysozyme Soaked with A Ruthenium Based Corm with A Pyridine Ligand (Complex 8)

All present enzymatic activity of Lysozyme Soaked with A Ruthenium Based Corm with A Pyridine Ligand (Complex 8):
3.2.1.17;

Protein crystallography data

The structure of Lysozyme Soaked with A Ruthenium Based Corm with A Pyridine Ligand (Complex 8), PDB code: 4uwv was solved by M.F.A.Santos, A.Mukhopadhyay, M.J.Romao, C.C.Romao, T.Santos-Silva, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.26 / 1.77
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 80.220, 80.220, 37.160, 90.00, 90.00, 90.00
R / Rfree (%) 18.099 / 22.198

Other elements in 4uwv:

The structure of Lysozyme Soaked with A Ruthenium Based Corm with A Pyridine Ligand (Complex 8) also contains other interesting chemical elements:

Ruthenium (Ru) 3 atoms
Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Lysozyme Soaked with A Ruthenium Based Corm with A Pyridine Ligand (Complex 8) (pdb code 4uwv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Lysozyme Soaked with A Ruthenium Based Corm with A Pyridine Ligand (Complex 8), PDB code: 4uwv:

Chlorine binding site 1 out of 1 in 4uwv

Go back to Chlorine Binding Sites List in 4uwv
Chlorine binding site 1 out of 1 in the Lysozyme Soaked with A Ruthenium Based Corm with A Pyridine Ligand (Complex 8)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Lysozyme Soaked with A Ruthenium Based Corm with A Pyridine Ligand (Complex 8) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1130

b:24.1
occ:1.00
 OH A:TYR23 2.9 15.6 1.0
CZ A:TYR23 3.6 14.0 1.0
CE2 A:TYR23 3.6 14.5 1.0
CA A:GLY104 4.1 16.2 1.0
O A:ARG21 4.6 24.3 1.0
N A:GLY104 4.6 19.1 1.0
CE1 A:TYR23 4.8 14.7 1.0
CD2 A:TYR23 4.9 14.6 1.0
NH1 A:ARG21 5.0 53.0 1.0
O A:HOH2027 5.0 31.3 1.0

Reference:

J.Seixas, M.F.A.Santos, A.Mukhopadhyay, A.C.Coelho, P.M.Reis, L.F.Veiros, A.R.Marques, N.Penacho, A.M.L.Goncalves, M.J Romao, G.J.L.Bernardes, T.Santos-Silva, C.C.Romao. A Contribution to the Rational Design of Ru(Co) 3CI2L Complexes For in Vivo Delivery of Co Dalton Trans 2014.
ISSN: ESSN 1477-9234
PubMed: 25427784
DOI: 10.1039/C4DT02966F
Page generated: Fri Jul 26 02:35:55 2024

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