Atomistry » Chlorine » PDB 4uvn-4v35 » 4uyu
Atomistry »
  Chlorine »
    PDB 4uvn-4v35 »
      4uyu »

Chlorine in PDB 4uyu: Structure of the Wnt Deacylase Notum - Crystal Form I Iodide Complex - 2.3A

Enzymatic activity of Structure of the Wnt Deacylase Notum - Crystal Form I Iodide Complex - 2.3A

All present enzymatic activity of Structure of the Wnt Deacylase Notum - Crystal Form I Iodide Complex - 2.3A:
3.1.1.1;

Protein crystallography data

The structure of Structure of the Wnt Deacylase Notum - Crystal Form I Iodide Complex - 2.3A, PDB code: 4uyu was solved by M.Zebisch, E.Y.Jones, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 88.78 / 2.30
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 74.220, 177.564, 60.991, 90.00, 90.00, 90.00
R / Rfree (%) 20.838 / 24.346

Other elements in 4uyu:

The structure of Structure of the Wnt Deacylase Notum - Crystal Form I Iodide Complex - 2.3A also contains other interesting chemical elements:

Iodine (I) 11 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of the Wnt Deacylase Notum - Crystal Form I Iodide Complex - 2.3A (pdb code 4uyu). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of the Wnt Deacylase Notum - Crystal Form I Iodide Complex - 2.3A, PDB code: 4uyu:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4uyu

Go back to Chlorine Binding Sites List in 4uyu
Chlorine binding site 1 out of 2 in the Structure of the Wnt Deacylase Notum - Crystal Form I Iodide Complex - 2.3A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of the Wnt Deacylase Notum - Crystal Form I Iodide Complex - 2.3A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1456

b:45.8
occ:1.00
NH1 A:ARG115 2.7 70.1 1.0
CZ A:ARG115 3.5 67.6 1.0
NH2 A:ARG115 3.7 69.2 1.0
NE A:ARG115 4.5 67.7 1.0
CG A:ARG115 4.5 60.8 1.0
CA A:ARG115 4.6 48.5 1.0
CB A:ARG115 4.8 54.1 1.0
OE1 A:GLU113 4.9 54.4 1.0
CD A:ARG115 5.0 66.0 1.0

Chlorine binding site 2 out of 2 in 4uyu

Go back to Chlorine Binding Sites List in 4uyu
Chlorine binding site 2 out of 2 in the Structure of the Wnt Deacylase Notum - Crystal Form I Iodide Complex - 2.3A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of the Wnt Deacylase Notum - Crystal Form I Iodide Complex - 2.3A within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1459

b:41.7
occ:1.00
CD B:ARG154 3.4 44.7 1.0
N A:LEU93 3.6 33.9 1.0
CG B:ARG154 3.8 41.8 1.0
NE B:ARG154 4.0 48.4 1.0
CB A:LEU93 4.1 33.7 1.0
CG A:LEU93 4.2 33.1 1.0
O A:LEU91 4.2 32.1 1.0
CA A:HIS92 4.3 32.9 1.0
CD1 A:LEU93 4.4 33.9 1.0
C A:HIS92 4.4 33.4 1.0
CA A:LEU93 4.4 34.1 1.0
CB B:ARG154 4.5 39.2 1.0
C A:LEU91 4.8 32.7 1.0
O A:LEU93 4.9 35.1 1.0
N A:HIS92 5.0 33.2 1.0

Reference:

S.Kakugawa, P.F.Langton, M.Zebisch, S.A.Howell, T.-H.Chang, Y.Liu, T.Feizi, G.Bineva, N.O'reilly, A.P.Snijders, E.Y.Jones, J.-P.Vincent. Notum Deacylates Wnt Proteins to Suppress Signalling Activity Nature 2015.
ISSN: ESSN 1476-4687
DOI: 10.1038/NATURE14259
Page generated: Fri Jul 26 02:36:53 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy