Chlorine in PDB 4v2v: JMJD2A Complexed with Ni(II), Nog and Histone H3K27ME3 Peptide (25-29) Ark(ME3)Sa

The structure of JMJD2A Complexed with Ni(II), Nog and Histone H3K27ME3 Peptide (25-29) Ark(ME3)Sa, PDB code: 4v2v was solved by R.Chowdhury, S.K.Madden, C.J.Schofield, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	53.589 / 2.00
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	101.020, 149.910, 57.380, 90.00, 90.00, 90.00
R / Rfree (%)	18.6 / 22.08

The structure of JMJD2A Complexed with Ni(II), Nog and Histone H3K27ME3 Peptide (25-29) Ark(ME3)Sa also contains other interesting chemical elements:

Nickel	(Ni)	2 atoms
Zinc	(Zn)	2 atoms

The binding sites of Chlorine atom in the JMJD2A Complexed with Ni(II), Nog and Histone H3K27ME3 Peptide (25-29) Ark(ME3)Sa (pdb code 4v2v). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the JMJD2A Complexed with Ni(II), Nog and Histone H3K27ME3 Peptide (25-29) Ark(ME3)Sa, PDB code: 4v2v:

Chlorine binding site 1 out of 1 in the JMJD2A Complexed with Ni(II), Nog and Histone H3K27ME3 Peptide (25-29) Ark(ME3)Sa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of JMJD2A Complexed with Ni(II), Nog and Histone H3K27ME3 Peptide (25-29) Ark(ME3)Sa within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1359 b:65.5 occ:1.00 N A:GLY229 3.1 40.4 1.0 CA A:GLY229 3.5 45.4 1.0 N A:SER230 3.5 41.1 1.0 C A:PHE227 3.5 36.8 1.0 CA A:PHE227 3.5 37.6 1.0 N A:PRO228 3.7 38.1 1.0 CB A:PHE227 3.9 33.9 1.0 CD A:PRO228 3.9 38.2 1.0 C A:GLY229 4.0 43.4 1.0 OG A:SER230 4.0 39.3 1.0 O A:PHE227 4.0 36.1 1.0 C A:PRO228 4.2 40.6 1.0 CD1 A:PHE227 4.2 39.8 1.0 CA A:PRO228 4.6 38.2 1.0 CB A:SER230 4.6 38.9 1.0 CG A:PHE227 4.6 35.3 1.0 CG A:PRO228 4.6 39.7 1.0 CA A:SER230 4.6 39.5 1.0 O A:PHE226 4.8 39.2 1.0 N A:PHE227 4.9 34.6 1.0

S.T.Williams, L.J.Walport, R.J.Hopkinson, S.K.Madden, R.Chowdhury, C.J.Schofield, A.Kawamura. Studies on the Catalytic Domains of Multiple Jmjc Oxygenases Using Peptide Substrates To Be Published.