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Chlorine in PDB 4v34: The Structure of A-Pgs From Pseudomonas Aeruginosa (Semet Derivative)

Enzymatic activity of The Structure of A-Pgs From Pseudomonas Aeruginosa (Semet Derivative)

All present enzymatic activity of The Structure of A-Pgs From Pseudomonas Aeruginosa (Semet Derivative):
2.3.2.11;

Protein crystallography data

The structure of The Structure of A-Pgs From Pseudomonas Aeruginosa (Semet Derivative), PDB code: 4v34 was solved by J.Krausze, S.Hebecker, T.Hasenkampf, D.W.Heinz, J.Moser, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.68 / 3.10
Space group P 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 93.690, 93.690, 166.160, 90.00, 90.00, 90.00
R / Rfree (%) 18.2 / 21.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Structure of A-Pgs From Pseudomonas Aeruginosa (Semet Derivative) (pdb code 4v34). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the The Structure of A-Pgs From Pseudomonas Aeruginosa (Semet Derivative), PDB code: 4v34:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 4v34

Go back to Chlorine Binding Sites List in 4v34
Chlorine binding site 1 out of 3 in the The Structure of A-Pgs From Pseudomonas Aeruginosa (Semet Derivative)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Structure of A-Pgs From Pseudomonas Aeruginosa (Semet Derivative) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1877

b:58.5
occ:1.00
NE A:ARG850 3.5 33.1 1.0
NE2 A:GLN636 3.9 32.3 1.0
OE1 A:GLU658 4.0 64.3 1.0
NH2 A:ARG850 4.0 28.3 1.0
CZ A:ARG850 4.3 29.6 1.0
OD2 A:ASP571 4.4 72.1 1.0
OE2 A:GLU658 4.5 75.0 1.0
CD A:ARG850 4.5 28.1 1.0
CD1 A:TYR605 4.5 32.0 1.0
CD A:GLU658 4.5 61.5 1.0
O A:GLN636 4.5 36.6 1.0
NH2 A:ARG660 4.6 57.9 1.0
CG A:ASP571 4.6 61.7 1.0
CG A:TYR605 4.7 30.9 1.0
CD A:GLN636 4.7 32.3 1.0
CG A:GLN636 4.8 31.0 1.0
CB A:ASP571 4.8 43.4 1.0
CE1 A:TYR605 4.8 44.7 1.0

Chlorine binding site 2 out of 3 in 4v34

Go back to Chlorine Binding Sites List in 4v34
Chlorine binding site 2 out of 3 in the The Structure of A-Pgs From Pseudomonas Aeruginosa (Semet Derivative)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Structure of A-Pgs From Pseudomonas Aeruginosa (Semet Derivative) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1878

b:71.2
occ:1.00
CG A:LYS775 3.6 0.2 1.0
N A:LYS775 3.9 71.8 1.0
CD A:LYS775 3.9 0.9 1.0
CA A:PRO774 3.9 53.3 1.0
CB A:PRO774 4.1 51.9 1.0
CE A:LYS775 4.2 0.2 1.0
C A:PRO774 4.4 63.3 1.0
CB A:LYS775 4.8 83.5 1.0
CG A:PRO774 4.9 48.3 1.0
CA A:LYS775 5.0 71.1 1.0

Chlorine binding site 3 out of 3 in 4v34

Go back to Chlorine Binding Sites List in 4v34
Chlorine binding site 3 out of 3 in the The Structure of A-Pgs From Pseudomonas Aeruginosa (Semet Derivative)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of The Structure of A-Pgs From Pseudomonas Aeruginosa (Semet Derivative) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1881

b:63.5
occ:1.00
OE2 A:GLU640 3.4 61.4 1.0
OD1 A:ASN641 4.0 48.7 1.0
CZ A:ARG614 4.1 31.8 1.0
CD A:ARG638 4.1 58.5 1.0
CD A:GLU640 4.1 62.0 1.0
NE2 A:GLN569 4.1 18.6 1.0
NE A:ARG614 4.2 41.9 1.0
NH2 A:ARG614 4.2 32.5 1.0
NH1 A:ARG638 4.3 51.7 1.0
NH1 A:ARG614 4.5 19.1 1.0
CD A:GLN569 4.5 21.4 1.0
OE1 A:GLU640 4.7 64.5 1.0
CG A:GLN569 4.7 13.3 1.0
CD A:ARG614 4.7 37.6 1.0
CG A:GLU640 4.9 52.7 1.0
CG A:ARG638 4.9 43.1 1.0
CG A:ASN641 4.9 38.9 1.0

Reference:

S.Hebecker, J.Krausze, T.Hasenkampf, J.Schneider, M.Groenewold, J.Reichelt, D.Jahn, D.W.Heinz, J.Moser. Structures of Two Bacterial Resistance Factors Mediating Trna-Dependent Aminoacylation of Phosphatidylglycerol with Lysine or Alanine. Proc.Natl.Acad.Sci.Usa V. 112 10691 2015.
ISSN: ISSN 0027-8424
PubMed: 26261323
DOI: 10.1073/PNAS.1511167112
Page generated: Fri Jul 26 02:40:16 2024

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