Chlorine in PDB 4w78: Crystal Structure of the CHSH1-CHSH2 Complex From Mycobacterium Tuberculosis
Protein crystallography data
The structure of Crystal Structure of the CHSH1-CHSH2 Complex From Mycobacterium Tuberculosis, PDB code: 4w78
was solved by
K.E.Guja,
M.Yang,
N.Sampson,
M.Garcia-Diaz,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
37.60 /
1.54
|
Space group
|
P 1 21 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
51.785,
134.096,
90.420,
90.00,
91.58,
90.00
|
R / Rfree (%)
|
17.7 /
20.5
|
Other elements in 4w78:
The structure of Crystal Structure of the CHSH1-CHSH2 Complex From Mycobacterium Tuberculosis also contains other interesting chemical elements:
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of the CHSH1-CHSH2 Complex From Mycobacterium Tuberculosis
(pdb code 4w78). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the
Crystal Structure of the CHSH1-CHSH2 Complex From Mycobacterium Tuberculosis, PDB code: 4w78:
Jump to Chlorine binding site number:
1;
2;
3;
4;
Chlorine binding site 1 out
of 4 in 4w78
Go back to
Chlorine Binding Sites List in 4w78
Chlorine binding site 1 out
of 4 in the Crystal Structure of the CHSH1-CHSH2 Complex From Mycobacterium Tuberculosis
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of the CHSH1-CHSH2 Complex From Mycobacterium Tuberculosis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl202
b:18.7
occ:1.00
|
O
|
B:HOH441
|
2.3
|
49.0
|
1.0
|
CD
|
B:CD201
|
2.6
|
13.4
|
1.0
|
O
|
B:HOH396
|
2.8
|
38.1
|
1.0
|
O
|
B:HOH366
|
2.9
|
26.7
|
1.0
|
N
|
B:ILE52
|
3.4
|
13.8
|
1.0
|
CG1
|
B:ILE52
|
3.6
|
16.4
|
1.0
|
O
|
B:HOH428
|
3.7
|
45.1
|
1.0
|
CB
|
B:ASN51
|
3.7
|
10.1
|
1.0
|
CD1
|
B:ILE52
|
3.7
|
20.4
|
1.0
|
NE2
|
B:HIS34
|
3.8
|
14.9
|
1.0
|
OD2
|
B:ASP29
|
3.8
|
13.8
|
1.0
|
O
|
B:HOH333
|
3.9
|
16.5
|
1.0
|
CB
|
B:ILE52
|
3.9
|
14.0
|
1.0
|
CE1
|
B:HIS34
|
3.9
|
16.1
|
1.0
|
CA
|
B:ASN51
|
4.0
|
10.9
|
1.0
|
C
|
B:ASN51
|
4.2
|
15.7
|
1.0
|
OE1
|
B:GLN31
|
4.2
|
20.6
|
1.0
|
CA
|
B:ILE52
|
4.3
|
12.1
|
1.0
|
O
|
B:HOH359
|
4.3
|
24.7
|
1.0
|
CG
|
B:ASN51
|
4.7
|
14.9
|
1.0
|
O
|
B:HOH387
|
4.8
|
34.9
|
1.0
|
ND2
|
B:ASN51
|
4.8
|
14.9
|
1.0
|
CG
|
B:ASP29
|
4.9
|
16.9
|
1.0
|
CD2
|
B:HIS34
|
4.9
|
13.5
|
1.0
|
|
Chlorine binding site 2 out
of 4 in 4w78
Go back to
Chlorine Binding Sites List in 4w78
Chlorine binding site 2 out
of 4 in the Crystal Structure of the CHSH1-CHSH2 Complex From Mycobacterium Tuberculosis
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of the CHSH1-CHSH2 Complex From Mycobacterium Tuberculosis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cl203
b:19.4
occ:1.00
|
CD
|
D:CD201
|
2.6
|
16.5
|
1.0
|
O
|
D:HOH338
|
3.3
|
22.4
|
1.0
|
N
|
D:ILE52
|
3.5
|
14.8
|
1.0
|
NE2
|
D:HIS34
|
3.6
|
15.5
|
1.0
|
CB
|
D:ASN51
|
3.7
|
10.8
|
1.0
|
OD2
|
D:ASP29
|
3.7
|
15.3
|
1.0
|
CE1
|
D:HIS34
|
3.8
|
12.3
|
1.0
|
CG1
|
D:ILE52
|
3.8
|
21.5
|
1.0
|
CD1
|
D:ILE52
|
3.8
|
23.8
|
1.0
|
O
|
D:HOH326
|
3.9
|
18.2
|
1.0
|
CA
|
D:ASN51
|
4.0
|
13.2
|
1.0
|
O
|
D:HOH356
|
4.0
|
28.0
|
1.0
|
OE1
|
D:GLN31
|
4.0
|
22.9
|
1.0
|
CB
|
D:ILE52
|
4.0
|
16.8
|
1.0
|
C
|
D:ASN51
|
4.2
|
17.1
|
1.0
|
CA
|
D:ILE52
|
4.4
|
14.6
|
1.0
|
O
|
D:HOH382
|
4.6
|
35.7
|
1.0
|
CG
|
D:ASN51
|
4.8
|
13.9
|
1.0
|
CG
|
D:ASP29
|
4.9
|
17.3
|
1.0
|
CD2
|
D:HIS34
|
4.9
|
12.9
|
1.0
|
O
|
C:HOH414
|
4.9
|
39.7
|
1.0
|
ND2
|
D:ASN51
|
5.0
|
14.9
|
1.0
|
|
Chlorine binding site 3 out
of 4 in 4w78
Go back to
Chlorine Binding Sites List in 4w78
Chlorine binding site 3 out
of 4 in the Crystal Structure of the CHSH1-CHSH2 Complex From Mycobacterium Tuberculosis
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of the CHSH1-CHSH2 Complex From Mycobacterium Tuberculosis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Cl202
b:14.3
occ:1.00
|
CD
|
F:CD201
|
2.6
|
12.5
|
1.0
|
O
|
E:HOH343
|
3.1
|
16.8
|
1.0
|
N
|
F:ILE52
|
3.4
|
10.4
|
1.0
|
CB
|
F:ASN51
|
3.6
|
8.2
|
1.0
|
NE2
|
F:HIS34
|
3.7
|
12.6
|
1.0
|
CG2
|
F:ILE52
|
3.7
|
13.9
|
1.0
|
OD2
|
F:ASP29
|
3.7
|
11.5
|
1.0
|
O
|
F:HOH326
|
3.7
|
15.5
|
1.0
|
CE1
|
F:HIS34
|
3.9
|
13.1
|
1.0
|
CB
|
E:ALA104
|
3.9
|
12.6
|
1.0
|
CA
|
F:ASN51
|
3.9
|
10.0
|
1.0
|
O
|
F:HOH335
|
4.1
|
20.2
|
1.0
|
CB
|
F:ILE52
|
4.1
|
11.9
|
1.0
|
C
|
F:ASN51
|
4.1
|
11.5
|
1.0
|
CA
|
F:ILE52
|
4.3
|
10.2
|
1.0
|
O
|
E:HOH349
|
4.4
|
19.2
|
1.0
|
CG
|
F:ASN51
|
4.7
|
14.8
|
1.0
|
O
|
E:HOH352
|
4.7
|
20.7
|
1.0
|
N
|
E:ALA104
|
4.7
|
12.7
|
1.0
|
ND2
|
F:ASN51
|
4.8
|
16.9
|
1.0
|
CD2
|
F:HIS34
|
4.9
|
9.7
|
1.0
|
CG
|
F:ASP29
|
4.9
|
10.0
|
1.0
|
CD1
|
F:LEU53
|
4.9
|
20.4
|
1.0
|
CA
|
E:ALA104
|
5.0
|
11.9
|
1.0
|
|
Chlorine binding site 4 out
of 4 in 4w78
Go back to
Chlorine Binding Sites List in 4w78
Chlorine binding site 4 out
of 4 in the Crystal Structure of the CHSH1-CHSH2 Complex From Mycobacterium Tuberculosis
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of the CHSH1-CHSH2 Complex From Mycobacterium Tuberculosis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Cl202
b:27.8
occ:1.00
|
O
|
H:HOH318
|
2.2
|
9.8
|
1.0
|
CD
|
H:CD201
|
2.6
|
21.7
|
1.0
|
O
|
G:HOH413
|
3.2
|
44.1
|
1.0
|
N
|
H:ILE52
|
3.4
|
16.3
|
1.0
|
CB
|
H:ASN51
|
3.5
|
12.8
|
1.0
|
NE2
|
H:HIS34
|
3.6
|
18.5
|
1.0
|
O
|
H:HOH347
|
3.7
|
28.1
|
1.0
|
OD2
|
H:ASP29
|
3.8
|
16.4
|
1.0
|
CG2
|
H:ILE52
|
3.8
|
23.6
|
1.0
|
CE1
|
H:HIS34
|
3.9
|
19.0
|
1.0
|
CA
|
H:ASN51
|
3.9
|
12.3
|
1.0
|
O
|
H:HOH344
|
4.1
|
26.8
|
1.0
|
C
|
H:ASN51
|
4.2
|
15.2
|
1.0
|
O
|
H:HOH317
|
4.2
|
51.7
|
1.0
|
O
|
H:HOH361
|
4.2
|
33.1
|
1.0
|
OE1
|
H:GLN31
|
4.2
|
25.5
|
1.0
|
CB
|
H:ILE52
|
4.2
|
20.4
|
1.0
|
CB
|
G:ALA104
|
4.3
|
32.8
|
1.0
|
CA
|
H:ILE52
|
4.4
|
15.9
|
1.0
|
O
|
G:HOH417
|
4.5
|
46.2
|
1.0
|
O
|
H:HOH409
|
4.6
|
51.9
|
1.0
|
CG
|
H:ASN51
|
4.6
|
20.2
|
1.0
|
CD2
|
H:HIS34
|
4.7
|
17.8
|
1.0
|
ND2
|
H:ASN51
|
4.8
|
18.7
|
1.0
|
N
|
G:ALA104
|
4.8
|
33.9
|
1.0
|
CG
|
H:ASP29
|
4.9
|
18.3
|
1.0
|
|
Reference:
M.Yang,
K.E.Guja,
S.T.Thomas,
M.Garcia-Diaz,
N.S.Sampson.
A Distinct Maoc-Like Enoyl-Coa Hydratase Architecture Mediates Cholesterol Catabolism in Mycobacterium Tuberculosis. Acs Chem.Biol. 2014.
ISSN: ESSN 1554-8937
PubMed: 25203216
DOI: 10.1021/CB500232H
Page generated: Fri Jul 26 02:42:02 2024
|