Chlorine in PDB 4w91: Crystal Structure of A Cysteine Desulfurase Sufs From Brucella Suis Bound to Plp
Protein crystallography data
The structure of Crystal Structure of A Cysteine Desulfurase Sufs From Brucella Suis Bound to Plp, PDB code: 4w91
was solved by
Seattle Structural Genomics Center For Infectious Disease,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
50.00 /
2.45
|
Space group
|
P 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
89.850,
121.910,
133.720,
111.49,
106.53,
89.81
|
R / Rfree (%)
|
23.7 /
25.2
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of A Cysteine Desulfurase Sufs From Brucella Suis Bound to Plp
(pdb code 4w91). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 7 binding sites of Chlorine where determined in the
Crystal Structure of A Cysteine Desulfurase Sufs From Brucella Suis Bound to Plp, PDB code: 4w91:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
7;
Chlorine binding site 1 out
of 7 in 4w91
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Chlorine Binding Sites List in 4w91
Chlorine binding site 1 out
of 7 in the Crystal Structure of A Cysteine Desulfurase Sufs From Brucella Suis Bound to Plp
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of A Cysteine Desulfurase Sufs From Brucella Suis Bound to Plp within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl501
b:69.8
occ:1.00
|
CD2
|
A:HIS351
|
3.7
|
64.5
|
1.0
|
CB
|
A:HIS351
|
3.7
|
62.8
|
1.0
|
OG
|
A:SER384
|
3.7
|
55.7
|
1.0
|
CB
|
A:SER384
|
3.7
|
56.9
|
1.0
|
ND1
|
A:HIS353
|
3.7
|
55.6
|
1.0
|
N
|
A:ALA352
|
3.9
|
60.0
|
1.0
|
CG
|
A:HIS351
|
4.0
|
64.3
|
1.0
|
CA
|
A:HIS351
|
4.2
|
63.0
|
1.0
|
N
|
A:HIS353
|
4.4
|
57.7
|
1.0
|
C
|
A:HIS351
|
4.5
|
61.4
|
1.0
|
CE1
|
A:HIS353
|
4.6
|
54.2
|
1.0
|
CG
|
A:HIS353
|
4.7
|
55.4
|
1.0
|
CB
|
A:ALA352
|
4.8
|
57.4
|
1.0
|
CA
|
A:ALA352
|
4.8
|
58.6
|
1.0
|
NE2
|
A:HIS351
|
4.8
|
66.2
|
1.0
|
CB
|
A:HIS353
|
4.9
|
56.8
|
1.0
|
|
Chlorine binding site 2 out
of 7 in 4w91
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Chlorine Binding Sites List in 4w91
Chlorine binding site 2 out
of 7 in the Crystal Structure of A Cysteine Desulfurase Sufs From Brucella Suis Bound to Plp
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of A Cysteine Desulfurase Sufs From Brucella Suis Bound to Plp within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl501
b:69.6
occ:1.00
|
OG
|
B:SER384
|
3.5
|
52.7
|
1.0
|
ND1
|
B:HIS353
|
3.5
|
53.9
|
1.0
|
CB
|
B:SER384
|
3.6
|
53.4
|
1.0
|
CD2
|
B:HIS351
|
3.7
|
61.8
|
1.0
|
CB
|
B:HIS351
|
3.8
|
61.0
|
1.0
|
N
|
B:ALA352
|
3.8
|
57.6
|
1.0
|
CG
|
B:HIS351
|
4.0
|
62.2
|
1.0
|
CA
|
B:HIS351
|
4.2
|
60.8
|
1.0
|
N
|
B:HIS353
|
4.3
|
56.1
|
1.0
|
CE1
|
B:HIS353
|
4.3
|
52.4
|
1.0
|
C
|
B:HIS351
|
4.4
|
59.4
|
1.0
|
CG
|
B:HIS353
|
4.5
|
54.2
|
1.0
|
CB
|
B:ALA352
|
4.6
|
54.6
|
1.0
|
CA
|
B:ALA352
|
4.7
|
56.3
|
1.0
|
CB
|
B:HIS353
|
4.7
|
55.9
|
1.0
|
NE2
|
B:HIS351
|
4.9
|
63.6
|
1.0
|
|
Chlorine binding site 3 out
of 7 in 4w91
Go back to
Chlorine Binding Sites List in 4w91
Chlorine binding site 3 out
of 7 in the Crystal Structure of A Cysteine Desulfurase Sufs From Brucella Suis Bound to Plp
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of A Cysteine Desulfurase Sufs From Brucella Suis Bound to Plp within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl501
b:86.7
occ:1.00
|
ND1
|
C:HIS353
|
3.3
|
54.2
|
1.0
|
CB
|
C:HIS351
|
3.6
|
59.3
|
1.0
|
OG
|
C:SER384
|
3.7
|
55.7
|
1.0
|
N
|
C:ALA352
|
3.7
|
57.2
|
1.0
|
CD2
|
C:HIS351
|
3.9
|
60.4
|
1.0
|
N
|
C:HIS353
|
4.0
|
55.7
|
1.0
|
CG
|
C:HIS351
|
4.0
|
60.3
|
1.0
|
CB
|
C:SER384
|
4.1
|
54.8
|
1.0
|
CA
|
C:HIS351
|
4.1
|
59.3
|
1.0
|
CE1
|
C:HIS353
|
4.2
|
53.3
|
1.0
|
C
|
C:HIS351
|
4.3
|
58.2
|
1.0
|
CG
|
C:HIS353
|
4.3
|
54.2
|
1.0
|
CB
|
C:HIS353
|
4.4
|
55.2
|
1.0
|
CA
|
C:ALA352
|
4.6
|
56.2
|
1.0
|
CB
|
C:ALA352
|
4.6
|
55.4
|
1.0
|
C
|
C:ALA352
|
4.8
|
55.8
|
1.0
|
CA
|
C:HIS353
|
4.9
|
55.3
|
1.0
|
|
Chlorine binding site 4 out
of 7 in 4w91
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Chlorine Binding Sites List in 4w91
Chlorine binding site 4 out
of 7 in the Crystal Structure of A Cysteine Desulfurase Sufs From Brucella Suis Bound to Plp
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of A Cysteine Desulfurase Sufs From Brucella Suis Bound to Plp within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cl501
b:53.0
occ:1.00
|
ND1
|
D:HIS353
|
3.2
|
51.4
|
1.0
|
OG
|
D:SER384
|
3.6
|
50.8
|
1.0
|
ND1
|
D:HIS351
|
3.6
|
56.6
|
1.0
|
CB
|
D:SER384
|
3.8
|
51.5
|
1.0
|
CB
|
D:HIS351
|
3.9
|
55.9
|
1.0
|
CE1
|
D:HIS353
|
4.0
|
50.5
|
1.0
|
CG
|
D:HIS351
|
4.1
|
57.0
|
1.0
|
N
|
D:ALA352
|
4.2
|
53.3
|
1.0
|
CG
|
D:HIS353
|
4.2
|
51.5
|
1.0
|
N
|
D:HIS353
|
4.2
|
52.2
|
1.0
|
CB
|
D:HIS353
|
4.4
|
52.4
|
1.0
|
CA
|
D:HIS351
|
4.5
|
55.5
|
1.0
|
CE1
|
D:HIS351
|
4.6
|
57.8
|
1.0
|
C
|
D:HIS351
|
4.7
|
54.4
|
1.0
|
CB
|
D:ALA352
|
4.9
|
51.3
|
1.0
|
CA
|
D:ALA352
|
4.9
|
52.2
|
1.0
|
CA
|
D:HIS353
|
5.0
|
52.2
|
1.0
|
|
Chlorine binding site 5 out
of 7 in 4w91
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Chlorine Binding Sites List in 4w91
Chlorine binding site 5 out
of 7 in the Crystal Structure of A Cysteine Desulfurase Sufs From Brucella Suis Bound to Plp
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Crystal Structure of A Cysteine Desulfurase Sufs From Brucella Suis Bound to Plp within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Cl501
b:72.3
occ:1.00
|
ND1
|
E:HIS353
|
3.4
|
54.3
|
1.0
|
CB
|
E:HIS351
|
3.6
|
60.8
|
1.0
|
OG
|
E:SER384
|
3.7
|
54.4
|
1.0
|
CD2
|
E:HIS351
|
3.8
|
62.2
|
1.0
|
CB
|
E:SER384
|
3.9
|
55.5
|
1.0
|
N
|
E:ALA352
|
3.9
|
58.2
|
1.0
|
CG
|
E:HIS351
|
3.9
|
62.0
|
1.0
|
N
|
E:HIS353
|
4.2
|
56.2
|
1.0
|
CA
|
E:HIS351
|
4.2
|
60.9
|
1.0
|
CE1
|
E:HIS353
|
4.3
|
53.1
|
1.0
|
CG
|
E:HIS353
|
4.4
|
54.2
|
1.0
|
C
|
E:HIS351
|
4.4
|
59.5
|
1.0
|
CB
|
E:HIS353
|
4.5
|
55.5
|
1.0
|
CA
|
E:ALA352
|
4.8
|
57.0
|
1.0
|
CB
|
E:ALA352
|
4.8
|
55.9
|
1.0
|
NE2
|
E:HIS351
|
5.0
|
63.7
|
1.0
|
CA
|
E:HIS353
|
5.0
|
55.7
|
1.0
|
|
Chlorine binding site 6 out
of 7 in 4w91
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Chlorine Binding Sites List in 4w91
Chlorine binding site 6 out
of 7 in the Crystal Structure of A Cysteine Desulfurase Sufs From Brucella Suis Bound to Plp
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of Crystal Structure of A Cysteine Desulfurase Sufs From Brucella Suis Bound to Plp within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Cl501
b:72.0
occ:1.00
|
CB
|
H:HIS351
|
3.7
|
62.3
|
1.0
|
ND1
|
H:HIS353
|
3.7
|
58.1
|
1.0
|
OG
|
H:SER384
|
3.7
|
57.9
|
1.0
|
CB
|
H:SER384
|
3.7
|
58.3
|
1.0
|
ND1
|
H:HIS351
|
3.8
|
62.7
|
1.0
|
N
|
H:ALA352
|
3.9
|
60.9
|
1.0
|
CG
|
H:HIS351
|
4.1
|
62.9
|
1.0
|
CA
|
H:HIS351
|
4.1
|
62.4
|
1.0
|
N
|
H:HIS353
|
4.3
|
60.0
|
1.0
|
C
|
H:HIS351
|
4.4
|
61.8
|
1.0
|
CE1
|
H:HIS353
|
4.5
|
57.4
|
1.0
|
CG
|
H:HIS353
|
4.7
|
58.4
|
1.0
|
CB
|
H:ALA352
|
4.7
|
59.5
|
1.0
|
CA
|
H:ALA352
|
4.8
|
60.4
|
1.0
|
CB
|
H:HIS353
|
4.8
|
59.4
|
1.0
|
CE1
|
H:HIS351
|
4.9
|
63.5
|
1.0
|
|
Chlorine binding site 7 out
of 7 in 4w91
Go back to
Chlorine Binding Sites List in 4w91
Chlorine binding site 7 out
of 7 in the Crystal Structure of A Cysteine Desulfurase Sufs From Brucella Suis Bound to Plp
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 7 of Crystal Structure of A Cysteine Desulfurase Sufs From Brucella Suis Bound to Plp within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
I:Cl501
b:79.8
occ:1.00
|
ND1
|
I:HIS353
|
3.4
|
70.6
|
1.0
|
CB
|
I:HIS351
|
3.7
|
73.5
|
1.0
|
OG
|
I:SER384
|
4.0
|
74.1
|
1.0
|
CG
|
I:HIS351
|
4.0
|
74.8
|
1.0
|
CB
|
I:SER384
|
4.2
|
76.0
|
1.0
|
N
|
I:ALA352
|
4.3
|
73.2
|
1.0
|
CE1
|
I:HIS353
|
4.3
|
70.6
|
1.0
|
CD2
|
I:HIS351
|
4.3
|
74.7
|
1.0
|
CG
|
I:HIS353
|
4.4
|
69.4
|
1.0
|
N
|
I:HIS353
|
4.4
|
70.5
|
1.0
|
CA
|
I:HIS351
|
4.4
|
74.2
|
1.0
|
CB
|
I:HIS353
|
4.5
|
69.2
|
1.0
|
C
|
I:HIS351
|
4.7
|
73.0
|
1.0
|
ND1
|
I:HIS351
|
4.7
|
76.5
|
1.0
|
|
Reference:
Seattle Structural Genomics Center For Infectious Disease,
Seattle Structural Genomics Center For Infectious Disease.
N/A N/A.
Page generated: Fri Jul 26 02:43:15 2024
|