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Chlorine in PDB 4wcj: Structure of Icab From Ammonifex Degensii

Protein crystallography data

The structure of Structure of Icab From Ammonifex Degensii, PDB code: 4wcj was solved by D.J.Little, N.C.Bamford, V.Pokrovskaya, H.Robinson, M.Nitz, P.L.Howell, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.51 / 1.70
Space group I 4
Cell size a, b, c (Å), α, β, γ (°) 84.686, 84.686, 71.940, 90.00, 90.00, 90.00
R / Rfree (%) 20.4 / 23.1

Other elements in 4wcj:

The structure of Structure of Icab From Ammonifex Degensii also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Icab From Ammonifex Degensii (pdb code 4wcj). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of Icab From Ammonifex Degensii, PDB code: 4wcj:

Chlorine binding site 1 out of 1 in 4wcj

Go back to Chlorine Binding Sites List in 4wcj
Chlorine binding site 1 out of 1 in the Structure of Icab From Ammonifex Degensii


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Icab From Ammonifex Degensii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:39.6
occ:1.00
O A:HOH423 3.4 38.5 1.0
N A:SER119 3.6 29.6 1.0
CA A:SER119 3.7 29.8 1.0
CB A:SER119 3.9 30.7 1.0
CG A:LEU118 3.9 32.5 1.0
C A:LEU118 4.0 28.0 1.0
CB A:LEU118 4.0 28.5 1.0
CD2 A:LEU47 4.0 34.3 1.0
CD A:ARG122 4.0 60.0 1.0
CD2 A:LEU118 4.1 37.0 1.0
O A:HOH440 4.2 37.2 1.0
NE A:ARG122 4.3 65.5 1.0
CD2 A:HIS123 4.4 42.6 1.0
CB A:ARG122 4.4 37.9 1.0
NE2 A:HIS123 4.4 47.1 1.0
O A:LEU118 4.4 27.3 1.0
CZ A:ARG122 4.5 71.0 1.0
NH2 A:ARG122 4.5 75.2 1.0
CA A:LEU118 4.6 27.1 1.0
OD2 A:ASP117 4.7 30.0 1.0
CG A:ARG122 4.8 49.4 1.0
O A:HOH417 4.9 31.1 1.0

Reference:

D.J.Little, N.C.Bamford, V.Podrovskaya, H.Robinson, M.Nitz, P.L.Howell. Structural Basis For the De-N-Acetylation of Poly-Beta-1,6-N-Acetyl-D-Glucosamine in Gram-Positive Bacteria. J.Biol.Chem. 2014.
ISSN: ESSN 1083-351X
PubMed: 25359777
DOI: 10.1074/JBC.M114.611400
Page generated: Fri Jul 26 02:49:43 2024

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