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Chlorine in PDB 4wj0: Structure of PH1245, A CAS1 From Pyrococcus Horikoshii

Protein crystallography data

The structure of Structure of PH1245, A CAS1 From Pyrococcus Horikoshii, PDB code: 4wj0 was solved by P.Petit, G.Brown, A.Savchenko, A.F.Yakunin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.34 / 2.85
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 125.890, 58.672, 90.147, 90.00, 90.00, 90.00
R / Rfree (%) 22.7 / 28.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of PH1245, A CAS1 From Pyrococcus Horikoshii (pdb code 4wj0). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of PH1245, A CAS1 From Pyrococcus Horikoshii, PDB code: 4wj0:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4wj0

Go back to Chlorine Binding Sites List in 4wj0
Chlorine binding site 1 out of 2 in the Structure of PH1245, A CAS1 From Pyrococcus Horikoshii


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of PH1245, A CAS1 From Pyrococcus Horikoshii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:30.0
occ:1.00
H A:ILE142 2.8 46.6 1.0
HZ1 A:LYS98 3.0 60.3 1.0
H A:THR143 3.6 56.4 1.0
HB A:ILE142 3.6 47.0 1.0
N A:ILE142 3.6 38.9 1.0
HZ2 A:LYS98 3.6 60.3 1.0
NZ A:LYS98 3.7 50.2 1.0
HA A:LYS141 3.8 48.9 1.0
HZ3 A:LYS98 3.8 60.3 1.0
HG12 A:ILE142 3.9 75.8 1.0
CB A:LYS141 4.0 40.7 1.0
HG23 A:THR143 4.0 46.5 1.0
CA A:LYS141 4.3 40.7 1.0
CB A:ILE142 4.3 39.1 1.0
N A:THR143 4.4 47.0 1.0
C A:LYS141 4.4 39.8 1.0
CG1 A:ILE142 4.5 63.2 1.0
CA A:ILE142 4.5 38.4 1.0
OG1 A:THR143 4.6 43.1 1.0
HG13 A:ILE142 4.6 75.8 1.0
HG1 A:THR143 4.7 51.7 1.0
CG2 A:THR143 4.8 38.8 1.0
HG21 A:THR143 4.8 46.5 1.0
CE A:LYS98 5.0 58.9 1.0
C A:ILE142 5.0 39.3 1.0

Chlorine binding site 2 out of 2 in 4wj0

Go back to Chlorine Binding Sites List in 4wj0
Chlorine binding site 2 out of 2 in the Structure of PH1245, A CAS1 From Pyrococcus Horikoshii


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of PH1245, A CAS1 From Pyrococcus Horikoshii within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl401

b:32.9
occ:1.00
HE B:ARG173 2.6 54.8 1.0
HH B:TYR157 2.7 52.9 1.0
HD2 B:ARG153 3.0 48.3 1.0
NE B:ARG173 3.4 45.7 1.0
OH B:TYR157 3.4 44.1 1.0
HG2 B:ARG173 3.5 76.9 1.0
HD22 B:ASN190 3.5 45.3 1.0
HH21 B:ARG173 3.6 47.5 1.0
HZ3 B:LYS232 3.7 44.1 1.0
HD21 B:ASN190 3.8 45.3 1.0
CD B:ARG153 3.8 40.2 1.0
HD3 B:ARG175 3.9 70.1 1.0
ND2 B:ASN190 4.0 37.8 1.0
HD3 B:ARG153 4.0 48.3 1.0
HE B:ARG153 4.0 48.8 1.0
HD3 B:ARG173 4.0 69.3 1.0
NE B:ARG153 4.1 40.6 1.0
HE2 B:TYR157 4.1 53.5 1.0
HE B:ARG175 4.1 81.8 1.0
CD B:ARG173 4.1 57.8 1.0
NH2 B:ARG173 4.2 39.6 1.0
CZ B:ARG173 4.2 36.1 1.0
HD3 B:LYS232 4.2 41.6 1.0
HE2 B:LYS232 4.2 46.2 1.0
CG B:ARG173 4.3 64.1 1.0
NE B:ARG175 4.3 68.2 1.0
NZ B:LYS232 4.5 36.8 1.0
CZ B:TYR157 4.5 44.6 1.0
CZ B:ARG175 4.5 82.5 1.0
CD B:ARG175 4.6 58.4 1.0
HG3 B:ARG173 4.6 76.9 1.0
CE2 B:TYR157 4.7 44.6 1.0
HZ1 B:LYS232 4.7 44.1 1.0
CE B:LYS232 4.7 38.5 1.0
HG22 B:ILE186 4.8 42.5 1.0
HH21 B:ARG175 4.8 0.6 1.0
NH2 B:ARG175 4.8 89.7 1.0
CZ B:ARG153 4.9 41.3 1.0
CD B:LYS232 4.9 34.6 1.0
HH22 B:ARG173 4.9 47.5 1.0
NH1 B:ARG175 5.0 89.5 1.0

Reference:

P.Petit, G.Brown, A.Savchenko, A.F.Yakunin. Structure of PH1245, A CAS1 From Pyrococcus Horikoshii To Be Published.
Page generated: Sat Dec 12 11:18:06 2020

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