Chlorine in PDB 4xos: ANP32A Lrr Domain
Protein crystallography data
The structure of ANP32A Lrr Domain, PDB code: 4xos
was solved by
S.Zamora-Caballero,
J.Bravo,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
45.09 /
1.56
|
Space group
|
P 1 21 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
48.040,
50.880,
63.020,
90.00,
110.19,
90.00
|
R / Rfree (%)
|
16 /
19.3
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the ANP32A Lrr Domain
(pdb code 4xos). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the
ANP32A Lrr Domain, PDB code: 4xos:
Jump to Chlorine binding site number:
1;
2;
Chlorine binding site 1 out
of 2 in 4xos
Go back to
Chlorine Binding Sites List in 4xos
Chlorine binding site 1 out
of 2 in the ANP32A Lrr Domain
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of ANP32A Lrr Domain within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl201
b:24.5
occ:1.00
|
H
|
A:LYS20
|
2.3
|
16.6
|
1.0
|
HH12
|
A:ARG14
|
2.6
|
29.6
|
1.0
|
H
|
A:GLU21
|
2.7
|
16.6
|
1.0
|
O
|
A:HOH383
|
3.1
|
32.7
|
1.0
|
N
|
A:LYS20
|
3.1
|
13.8
|
1.0
|
HB2
|
A:LYS20
|
3.2
|
21.3
|
1.0
|
HA
|
A:VAL19
|
3.3
|
19.7
|
1.0
|
O
|
A:HOH317
|
3.4
|
32.8
|
1.0
|
NH1
|
A:ARG14
|
3.5
|
24.6
|
1.0
|
HG1
|
B:THR55
|
3.5
|
31.1
|
1.0
|
HB
|
B:THR55
|
3.5
|
32.3
|
1.0
|
HG13
|
A:VAL19
|
3.5
|
23.2
|
1.0
|
N
|
A:GLU21
|
3.5
|
13.8
|
1.0
|
HH22
|
A:ARG14
|
3.8
|
33.9
|
1.0
|
HH11
|
A:ARG14
|
3.9
|
29.6
|
1.0
|
O
|
A:GLU21
|
3.9
|
18.6
|
1.0
|
CB
|
A:LYS20
|
3.9
|
17.8
|
1.0
|
CA
|
A:LYS20
|
3.9
|
12.7
|
1.0
|
HG2
|
A:LYS20
|
4.0
|
26.1
|
1.0
|
OG1
|
B:THR55
|
4.0
|
25.9
|
1.0
|
CA
|
A:VAL19
|
4.1
|
16.4
|
1.0
|
C
|
A:VAL19
|
4.1
|
16.8
|
1.0
|
HB2
|
A:GLU21
|
4.1
|
23.1
|
1.0
|
HG21
|
B:THR55
|
4.1
|
37.0
|
1.0
|
CB
|
B:THR55
|
4.2
|
26.9
|
1.0
|
C
|
A:LYS20
|
4.3
|
14.2
|
1.0
|
HG12
|
A:VAL19
|
4.3
|
23.2
|
1.0
|
CG1
|
A:VAL19
|
4.3
|
19.3
|
1.0
|
CZ
|
A:ARG14
|
4.4
|
24.3
|
1.0
|
NH2
|
A:ARG14
|
4.4
|
28.2
|
1.0
|
CG
|
A:LYS20
|
4.4
|
21.8
|
1.0
|
CA
|
A:GLU21
|
4.5
|
14.6
|
1.0
|
HG3
|
A:GLU21
|
4.5
|
46.1
|
1.0
|
C
|
A:GLU21
|
4.6
|
15.4
|
1.0
|
O
|
A:ASP18
|
4.6
|
26.9
|
1.0
|
CG2
|
B:THR55
|
4.7
|
30.8
|
1.0
|
O
|
B:HOH334
|
4.7
|
31.9
|
1.0
|
HB3
|
A:LYS20
|
4.7
|
21.3
|
1.0
|
CB
|
A:GLU21
|
4.7
|
19.2
|
1.0
|
HG3
|
A:LYS20
|
4.7
|
26.1
|
1.0
|
CB
|
A:VAL19
|
4.8
|
19.3
|
1.0
|
HA
|
A:LYS20
|
4.8
|
15.2
|
1.0
|
HG22
|
A:VAL19
|
4.8
|
25.9
|
1.0
|
|
Chlorine binding site 2 out
of 2 in 4xos
Go back to
Chlorine Binding Sites List in 4xos
Chlorine binding site 2 out
of 2 in the ANP32A Lrr Domain
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of ANP32A Lrr Domain within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl202
b:30.2
occ:1.00
|
H
|
B:LYS20
|
2.3
|
22.6
|
1.0
|
H
|
B:GLU21
|
2.6
|
18.0
|
1.0
|
HH12
|
B:ARG14
|
2.7
|
28.5
|
1.0
|
N
|
B:LYS20
|
3.2
|
18.8
|
1.0
|
HA
|
B:VAL19
|
3.2
|
20.5
|
1.0
|
HB2
|
B:LYS20
|
3.3
|
28.7
|
1.0
|
N
|
B:GLU21
|
3.4
|
15.0
|
1.0
|
NH1
|
B:ARG14
|
3.4
|
23.8
|
1.0
|
HH11
|
B:ARG14
|
3.5
|
28.5
|
1.0
|
HB2
|
B:GLU21
|
3.7
|
30.6
|
1.0
|
HG13
|
B:VAL19
|
3.8
|
27.5
|
1.0
|
O
|
B:GLU21
|
3.8
|
17.7
|
1.0
|
CA
|
B:LYS20
|
3.9
|
18.8
|
1.0
|
O
|
B:HOH359
|
4.0
|
36.9
|
1.0
|
CA
|
B:VAL19
|
4.0
|
17.1
|
1.0
|
CB
|
B:LYS20
|
4.0
|
23.9
|
1.0
|
C
|
B:VAL19
|
4.1
|
22.1
|
1.0
|
O
|
B:HOH322
|
4.1
|
34.1
|
1.0
|
HG3
|
B:LYS20
|
4.1
|
43.0
|
1.0
|
O
|
B:ASP18
|
4.1
|
30.7
|
1.0
|
C
|
B:LYS20
|
4.1
|
15.0
|
1.0
|
HG3
|
B:GLU21
|
4.2
|
62.4
|
1.0
|
CA
|
B:GLU21
|
4.3
|
15.6
|
1.0
|
CB
|
B:GLU21
|
4.4
|
25.5
|
1.0
|
HG12
|
B:VAL19
|
4.4
|
27.5
|
1.0
|
CG1
|
B:VAL19
|
4.4
|
22.9
|
1.0
|
C
|
B:GLU21
|
4.5
|
17.1
|
1.0
|
HH22
|
B:ARG14
|
4.5
|
37.7
|
1.0
|
CG
|
B:LYS20
|
4.6
|
35.9
|
1.0
|
CZ
|
B:ARG14
|
4.6
|
27.2
|
1.0
|
CG
|
B:GLU21
|
4.8
|
52.0
|
1.0
|
HB3
|
B:LYS20
|
4.8
|
28.7
|
1.0
|
CB
|
B:VAL19
|
4.8
|
18.0
|
1.0
|
HA
|
B:LYS20
|
4.8
|
22.6
|
1.0
|
NH2
|
B:ARG14
|
5.0
|
31.4
|
1.0
|
C
|
B:ASP18
|
5.0
|
27.1
|
1.0
|
|
Reference:
S.Zamora-Caballero,
L.Siauciunaite-Gaubard,
J.Bravo.
High-Resolution Crystal Structure of the Leucine-Rich Repeat Domain of the Human Tumour Suppressor PP32A (ANP32A). Acta Crystallogr.,Sect.F V. 71 684 2015.
ISSN: ESSN 2053-230X
PubMed: 26057796
DOI: 10.1107/S2053230X15006457
Page generated: Fri Jul 26 03:33:14 2024
|