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Chlorine in PDB 4xr5: X-Ray Structure of the Unliganded Thymidine Phosphorylase From Salmonella Typhimurium at 2.05 A Resolution

Enzymatic activity of X-Ray Structure of the Unliganded Thymidine Phosphorylase From Salmonella Typhimurium at 2.05 A Resolution

All present enzymatic activity of X-Ray Structure of the Unliganded Thymidine Phosphorylase From Salmonella Typhimurium at 2.05 A Resolution:
2.4.2.4;

Protein crystallography data

The structure of X-Ray Structure of the Unliganded Thymidine Phosphorylase From Salmonella Typhimurium at 2.05 A Resolution, PDB code: 4xr5 was solved by V.V.Balaev, A.A.Lashkov, A.G.Gabdulkhakov, C.Betzel, A.M.Mikhailov, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.72 / 2.05
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 114.942, 171.213, 45.343, 90.00, 90.00, 90.00
R / Rfree (%) 22.1 / 24.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the X-Ray Structure of the Unliganded Thymidine Phosphorylase From Salmonella Typhimurium at 2.05 A Resolution (pdb code 4xr5). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the X-Ray Structure of the Unliganded Thymidine Phosphorylase From Salmonella Typhimurium at 2.05 A Resolution, PDB code: 4xr5:

Chlorine binding site 1 out of 1 in 4xr5

Go back to Chlorine Binding Sites List in 4xr5
Chlorine binding site 1 out of 1 in the X-Ray Structure of the Unliganded Thymidine Phosphorylase From Salmonella Typhimurium at 2.05 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of X-Ray Structure of the Unliganded Thymidine Phosphorylase From Salmonella Typhimurium at 2.05 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl501

b:60.5
occ:1.00
 N B:ARG268 3.0 41.6 1.0
O B:ARG268 3.8 56.2 1.0
CA B:ARG268 3.9 33.5 1.0
C B:TYR267 3.9 41.2 1.0
CB B:ARG268 4.0 46.0 1.0
CA B:TYR267 4.0 41.2 1.0
CD1 B:TYR267 4.2 49.2 1.0
C B:ARG268 4.2 37.1 1.0
O B:GLU266 4.7 59.5 1.0
CE1 B:TYR267 4.8 44.6 1.0
CG B:ARG268 4.9 51.7 1.0
N B:TYR267 4.9 53.0 1.0
CG B:TYR267 4.9 47.4 1.0
O B:GLY265 5.0 54.6 1.0

Reference:

V.V.Balaev, A.A.Lashkov, A.G.Gabdulkhakov, M.V.Dontsova, T.A.Seregina, A.S.Mironov, C.Betzel, A.M.Mikhailov. Structural Investigation of the Thymidine Phosphorylase From Salmonella Typhimurium in the Unliganded State and Its Complexes with Thymidine and Uridine. Acta Crystallogr.,Sect.F V. 72 224 2016.
ISSN: ESSN 2053-230X
PubMed: 26919527
DOI: 10.1107/S2053230X1600162X
Page generated: Sat Dec 12 11:21:12 2020

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