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Chlorine in PDB 4y89: Crystal Structure of the N-Terminal Domain of CEACAM7

Protein crystallography data

The structure of Crystal Structure of the N-Terminal Domain of CEACAM7, PDB code: 4y89 was solved by D.A.Bonsor, E.J.Sundberg, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 103.16 / 1.47
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 32.623, 64.886, 103.164, 90.00, 89.99, 90.00
R / Rfree (%) 14.3 / 19.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the N-Terminal Domain of CEACAM7 (pdb code 4y89). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of the N-Terminal Domain of CEACAM7, PDB code: 4y89:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 4y89

Go back to Chlorine Binding Sites List in 4y89
Chlorine binding site 1 out of 3 in the Crystal Structure of the N-Terminal Domain of CEACAM7


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the N-Terminal Domain of CEACAM7 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:27.2
occ:1.00
O A:HOH324 3.1 42.6 1.0
N A:ILE87 3.3 18.5 1.0
O A:HOH361 3.7 38.0 1.0
CA A:GLY86 3.8 19.3 1.0
CE A:LYS36 3.8 22.9 1.0
CB A:ILE87 4.0 20.0 1.0
C A:GLY86 4.1 18.1 1.0
CA A:ILE87 4.1 17.9 1.0
CG1 A:ILE87 4.1 27.8 1.0
O A:ILE87 4.1 19.8 1.0
NZ A:LYS36 4.3 26.1 1.0
CD1 A:ILE87 4.3 33.9 1.0
O A:ALA85 4.5 22.5 1.0
CA A:GLY37 4.5 20.5 1.0
C A:ILE87 4.6 17.4 1.0
N A:GLY37 4.6 20.5 1.0
CG A:LYS36 4.7 21.2 1.0
CD A:LYS36 4.8 21.6 1.0
N A:GLY86 4.9 19.1 1.0

Chlorine binding site 2 out of 3 in 4y89

Go back to Chlorine Binding Sites List in 4y89
Chlorine binding site 2 out of 3 in the Crystal Structure of the N-Terminal Domain of CEACAM7


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the N-Terminal Domain of CEACAM7 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl201

b:28.2
occ:1.00
N B:ILE87 3.2 17.9 1.0
CA B:GLY86 3.8 19.0 1.0
O B:HOH356 3.8 41.0 1.0
CE B:LYS36 3.9 23.9 1.0
CB B:ILE87 4.0 18.8 1.0
C B:GLY86 4.0 18.2 1.0
CA B:ILE87 4.1 17.0 1.0
O B:ILE87 4.1 19.6 1.0
CG1 B:ILE87 4.2 25.1 1.0
NZ B:LYS36 4.2 25.6 1.0
CD1 B:ILE87 4.4 28.9 1.0
O B:ALA85 4.4 22.6 1.0
CA B:GLY37 4.5 19.9 1.0
C B:ILE87 4.6 20.7 1.0
N B:GLY37 4.7 18.1 1.0
CD B:LYS36 4.7 18.8 1.0
CG B:LYS36 4.7 19.3 1.0
N B:GLY86 5.0 17.1 1.0

Chlorine binding site 3 out of 3 in 4y89

Go back to Chlorine Binding Sites List in 4y89
Chlorine binding site 3 out of 3 in the Crystal Structure of the N-Terminal Domain of CEACAM7


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of the N-Terminal Domain of CEACAM7 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl201

b:70.3
occ:1.00
N D:GLN105 3.0 24.7 1.0
O D:GLN105 3.3 24.1 1.0
CE1 D:PHE10 3.6 49.5 1.0
CD D:ARG104 3.7 24.9 1.0
CA D:ARG104 3.7 22.0 1.0
CB D:ARG104 3.8 23.6 1.0
C D:ARG104 3.8 22.9 1.0
CA D:GLN105 3.9 21.1 1.0
C D:GLN105 4.0 20.6 1.0
CG2 D:VAL7 4.1 26.6 1.0
CB D:GLN105 4.1 30.8 1.0
CD1 D:PHE10 4.1 39.9 1.0
CG D:ARG104 4.3 25.4 1.0
O D:HOH343 4.4 50.4 1.0
CZ D:PHE10 4.7 49.5 1.0
CG D:GLN105 4.8 43.2 1.0
NE D:ARG104 4.8 26.5 1.0
O D:ARG104 5.0 21.0 1.0

Reference:

D.A.Bonsor, D.Beckett, E.J.Sundberg. Structure of the N-Terminal Dimerization Domain of CEACAM7. Acta Crystallogr.,Sect.F V. 71 1169 2015.
ISSN: ESSN 2053-230X
PubMed: 26323304
DOI: 10.1107/S2053230X15013576
Page generated: Fri Jul 26 03:54:11 2024

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