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Chlorine in PDB 4y9x: Crystal Structure of Glucosyl-3-Phosphoglycerate Synthase From Mycobacterium Tuberculosis in Complex with MN2+, Uridine-Diphosphate- Glucose (Udp-Glc) and Phosphoglyceric Acid (Pga) - Gpgs MN2+ Udp-Glc Pga-3

Enzymatic activity of Crystal Structure of Glucosyl-3-Phosphoglycerate Synthase From Mycobacterium Tuberculosis in Complex with MN2+, Uridine-Diphosphate- Glucose (Udp-Glc) and Phosphoglyceric Acid (Pga) - Gpgs MN2+ Udp-Glc Pga-3

All present enzymatic activity of Crystal Structure of Glucosyl-3-Phosphoglycerate Synthase From Mycobacterium Tuberculosis in Complex with MN2+, Uridine-Diphosphate- Glucose (Udp-Glc) and Phosphoglyceric Acid (Pga) - Gpgs MN2+ Udp-Glc Pga-3:
2.4.1.266;

Protein crystallography data

The structure of Crystal Structure of Glucosyl-3-Phosphoglycerate Synthase From Mycobacterium Tuberculosis in Complex with MN2+, Uridine-Diphosphate- Glucose (Udp-Glc) and Phosphoglyceric Acid (Pga) - Gpgs MN2+ Udp-Glc Pga-3, PDB code: 4y9x was solved by D.Albesa-Jove, A.Rodrigo-Unzueta, J.O.Cifuente, S.Urresti, N.Comino, E.Sancho-Vaello, M.E.Guerin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.06 / 2.64
Space group I 41
Cell size a, b, c (Å), α, β, γ (°) 98.850, 98.850, 127.790, 90.00, 90.00, 90.00
R / Rfree (%) 21.4 / 25.2

Other elements in 4y9x:

The structure of Crystal Structure of Glucosyl-3-Phosphoglycerate Synthase From Mycobacterium Tuberculosis in Complex with MN2+, Uridine-Diphosphate- Glucose (Udp-Glc) and Phosphoglyceric Acid (Pga) - Gpgs MN2+ Udp-Glc Pga-3 also contains other interesting chemical elements:

Manganese (Mn) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Glucosyl-3-Phosphoglycerate Synthase From Mycobacterium Tuberculosis in Complex with MN2+, Uridine-Diphosphate- Glucose (Udp-Glc) and Phosphoglyceric Acid (Pga) - Gpgs MN2+ Udp-Glc Pga-3 (pdb code 4y9x). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Glucosyl-3-Phosphoglycerate Synthase From Mycobacterium Tuberculosis in Complex with MN2+, Uridine-Diphosphate- Glucose (Udp-Glc) and Phosphoglyceric Acid (Pga) - Gpgs MN2+ Udp-Glc Pga-3, PDB code: 4y9x:

Chlorine binding site 1 out of 1 in 4y9x

Go back to Chlorine Binding Sites List in 4y9x
Chlorine binding site 1 out of 1 in the Crystal Structure of Glucosyl-3-Phosphoglycerate Synthase From Mycobacterium Tuberculosis in Complex with MN2+, Uridine-Diphosphate- Glucose (Udp-Glc) and Phosphoglyceric Acid (Pga) - Gpgs MN2+ Udp-Glc Pga-3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Glucosyl-3-Phosphoglycerate Synthase From Mycobacterium Tuberculosis in Complex with MN2+, Uridine-Diphosphate- Glucose (Udp-Glc) and Phosphoglyceric Acid (Pga) - Gpgs MN2+ Udp-Glc Pga-3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl402

b:0.7
occ:1.00
NH1 A:ARG242 3.3 0.7 1.0
NZ A:LYS319 3.5 0.3 1.0
CZ A:ARG242 4.3 99.2 1.0
NH2 A:ARG242 4.3 96.7 1.0
CB A:SER222 4.8 72.5 1.0
CE A:LYS319 4.8 0.3 1.0

Reference:

D.Albesa-Jove, F.Mendoza, A.Rodrigo-Unzueta, F.Gomollon-Bel, J.O.Cifuente, S.Urresti, N.Comino, H.Gomez, J.Romero-Garcia, J.M.Lluch, E.Sancho-Vaello, X.Biarnes, A.Planas, P.Merino, L.Masgrau, M.E.Guerin. A Native Ternary Complex Trapped in A Crystal Reveals the Catalytic Mechanism of A Retaining Glycosyltransferase. Angew.Chem.Int.Ed.Engl. V. 54 9898 2015.
ISSN: ESSN 1521-3773
PubMed: 26136334
DOI: 10.1002/ANIE.201504617
Page generated: Sat Dec 12 11:24:31 2020

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