Atomistry » Chlorine » PDB 4ydn-4ylb » 4yf6
Atomistry »
  Chlorine »
    PDB 4ydn-4ylb »
      4yf6 »

Chlorine in PDB 4yf6: Crystal Structure of Oxidised RV1284

Enzymatic activity of Crystal Structure of Oxidised RV1284

All present enzymatic activity of Crystal Structure of Oxidised RV1284:
4.2.1.1;

Protein crystallography data

The structure of Crystal Structure of Oxidised RV1284, PDB code: 4yf6 was solved by A.Hofmann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.39 / 3.00
Space group F 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 101.068, 153.947, 157.174, 90.00, 90.00, 90.00
R / Rfree (%) 16.7 / 26

Other elements in 4yf6:

The structure of Crystal Structure of Oxidised RV1284 also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms
Zinc (Zn) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Oxidised RV1284 (pdb code 4yf6). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Oxidised RV1284, PDB code: 4yf6:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4yf6

Go back to Chlorine Binding Sites List in 4yf6
Chlorine binding site 1 out of 2 in the Crystal Structure of Oxidised RV1284


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Oxidised RV1284 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:37.0
occ:1.00
NH1 B:ARG57 2.9 6.0 1.0
NH1 A:ARG57 3.0 8.6 1.0
CD A:ARG57 3.5 8.6 1.0
CD B:ARG57 3.8 6.0 1.0
CG1 B:VAL55 3.9 5.2 1.0
CZ B:ARG57 4.0 6.0 1.0
CZ A:ARG57 4.0 8.6 1.0
CG1 A:VAL55 4.1 5.0 1.0
NE A:ARG57 4.2 8.6 1.0
CD1 B:TYR43 4.4 10.6 1.0
NE B:ARG57 4.4 6.0 1.0
CB B:VAL55 4.5 5.2 1.0
CE1 B:TYR43 4.5 10.6 1.0
CB A:VAL42 4.5 8.4 1.0
CG A:ARG57 4.7 8.6 1.0
CD1 A:TYR43 4.7 5.8 1.0
CB A:VAL55 4.8 5.0 1.0
CG2 A:VAL42 4.8 8.4 1.0
CG2 B:VAL55 4.8 5.2 1.0
N A:VAL42 4.9 20.9 1.0
CB B:VAL42 5.0 4.0 1.0

Chlorine binding site 2 out of 2 in 4yf6

Go back to Chlorine Binding Sites List in 4yf6
Chlorine binding site 2 out of 2 in the Crystal Structure of Oxidised RV1284


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Oxidised RV1284 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl202

b:37.0
occ:1.00
NH1 D:ARG57 2.8 5.4 1.0
NH1 C:ARG57 3.0 7.9 1.0
CD D:ARG57 3.8 5.4 1.0
CG1 D:VAL55 3.9 9.9 1.0
CD C:ARG57 3.9 7.9 1.0
CZ D:ARG57 3.9 5.4 1.0
CZ C:ARG57 4.2 7.9 1.0
NE D:ARG57 4.3 5.4 1.0
CD1 D:TYR43 4.3 10.8 1.0
CG1 C:VAL55 4.4 16.0 1.0
CD1 C:TYR43 4.5 25.5 1.0
CB D:VAL42 4.5 7.6 1.0
NE C:ARG57 4.5 7.9 1.0
CE1 D:TYR43 4.7 10.8 1.0
CB D:VAL55 4.7 9.9 1.0
CB C:VAL42 4.8 7.7 1.0
CG D:ARG57 4.9 5.4 1.0
CE1 C:TYR43 4.9 25.5 1.0
N D:VAL42 5.0 28.5 1.0

Reference:

L.Nienaber, E.Cave-Freeman, M.Cross, L.Mason, U.M.Bailey, P.Amani, R.Davis, P.Taylor, A.Hofmann. Chemical Probing Suggests Redox-Regulation of the Carbonic Anhydrase Activity of Mycobacterial RV1284. Febs J. 2015.
ISSN: ISSN 1742-464X
PubMed: 25929542
DOI: 10.1111/FEBS.13313
Page generated: Fri Jul 26 04:03:07 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy