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Chlorine in PDB 4zho: The Crystal Structure of Arabidopsis Ferredoxin 2 with 2FE-2S Cluster

Protein crystallography data

The structure of The Crystal Structure of Arabidopsis Ferredoxin 2 with 2FE-2S Cluster, PDB code: 4zho was solved by R.Grinter, I.Josts, A.W.Roszak, R.J.Cogdell, D.Walker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 60.73 / 2.34
Space group P 42 21 2
Cell size a, b, c (Å), α, β, γ (°) 60.730, 60.730, 154.730, 90.00, 90.00, 90.00
R / Rfree (%) 19.7 / 21.6

Other elements in 4zho:

The structure of The Crystal Structure of Arabidopsis Ferredoxin 2 with 2FE-2S Cluster also contains other interesting chemical elements:

Iron (Fe) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Crystal Structure of Arabidopsis Ferredoxin 2 with 2FE-2S Cluster (pdb code 4zho). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the The Crystal Structure of Arabidopsis Ferredoxin 2 with 2FE-2S Cluster, PDB code: 4zho:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4zho

Go back to Chlorine Binding Sites List in 4zho
Chlorine binding site 1 out of 2 in the The Crystal Structure of Arabidopsis Ferredoxin 2 with 2FE-2S Cluster


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Crystal Structure of Arabidopsis Ferredoxin 2 with 2FE-2S Cluster within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:66.8
occ:1.00
N A:ASP85 3.2 46.4 1.0
CB A:SER84 3.6 56.1 1.0
CA A:SER84 3.8 51.1 1.0
CB A:ASP85 3.9 47.6 1.0
CG A:ASP85 4.0 52.7 1.0
C A:SER84 4.0 49.5 1.0
CA A:ASP85 4.1 49.0 1.0
OD2 A:ASP85 4.2 56.0 1.0
OD1 A:ASP85 4.4 52.4 1.0
OG A:SER84 4.5 52.8 1.0
O A:ASP85 4.7 54.4 1.0
CD1 A:TYR4 4.8 48.2 1.0
CE1 A:TYR4 4.8 48.9 1.0
C A:ASP85 4.9 50.6 1.0

Chlorine binding site 2 out of 2 in 4zho

Go back to Chlorine Binding Sites List in 4zho
Chlorine binding site 2 out of 2 in the The Crystal Structure of Arabidopsis Ferredoxin 2 with 2FE-2S Cluster


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Crystal Structure of Arabidopsis Ferredoxin 2 with 2FE-2S Cluster within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl202

b:63.1
occ:1.00
N B:ASP85 3.3 42.1 1.0
CB B:SER84 3.6 53.0 1.0
CA B:SER84 3.7 47.5 1.0
OD2 B:ASP85 4.0 54.7 1.0
C B:SER84 4.0 44.7 1.0
CG B:ASP85 4.0 53.6 1.0
O B:HOH304 4.1 59.1 1.0
CB B:ASP85 4.2 50.3 1.0
CA B:ASP85 4.3 44.4 1.0
OD1 B:ASP85 4.5 47.8 1.0
OG B:SER84 4.5 56.2 1.0
O B:ASP85 4.7 44.7 1.0
CD1 B:TYR4 4.8 41.1 1.0
CE1 B:TYR4 4.8 44.9 1.0

Reference:

R.Grinter, I.Josts, K.Mosbahi, A.W.Roszak, R.J.Cogdell, A.M.Bonvin, J.J.Milner, S.M.Kelly, O.Byron, B.O.Smith, D.Walker. Structure of the Bacterial Plant-Ferredoxin Receptor Fusa. Nat Commun V. 7 13308 2016.
ISSN: ESSN 2041-1723
PubMed: 27796364
DOI: 10.1038/NCOMMS13308
Page generated: Sat Dec 12 11:28:14 2020

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