Atomistry » Chlorine » PDB 4zg7-4zno » 4ziq
Atomistry »
  Chlorine »
    PDB 4zg7-4zno »
      4ziq »

Chlorine in PDB 4ziq: Crystal Structure of Trypsin Activated Alpha-2-Macroglobulin From Escherichia Coli.

Protein crystallography data

The structure of Crystal Structure of Trypsin Activated Alpha-2-Macroglobulin From Escherichia Coli., PDB code: 4ziq was solved by I.Garcia-Ferrer, P.Arede, J.Gomez-Blanco, D.Luque, S.Duquerroy, J.R.Caston, T.Goulas, X.F.Gomis-Ruth, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.68 / 2.55
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 274.280, 95.360, 81.090, 90.00, 104.77, 90.00
R / Rfree (%) 19 / 22.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Trypsin Activated Alpha-2-Macroglobulin From Escherichia Coli. (pdb code 4ziq). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Trypsin Activated Alpha-2-Macroglobulin From Escherichia Coli., PDB code: 4ziq:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 4ziq

Go back to Chlorine Binding Sites List in 4ziq
Chlorine binding site 1 out of 3 in the Crystal Structure of Trypsin Activated Alpha-2-Macroglobulin From Escherichia Coli.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Trypsin Activated Alpha-2-Macroglobulin From Escherichia Coli. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1702

b:74.8
occ:0.50
CA A:TYR1635 4.0 62.2 1.0
O A:MET1634 4.1 66.2 1.0
N A:TYR1635 4.1 61.2 1.0
C A:MET1634 4.1 65.0 1.0
NH2 A:ARG1487 4.2 69.2 1.0
CD1 A:TYR1635 4.2 71.8 1.0
NH1 A:ARG1487 4.3 68.6 1.0
CZ A:ARG1487 4.4 83.1 1.0
CB A:TYR1635 4.5 63.2 1.0
CB A:MET1634 4.6 62.4 1.0
CG A:TYR1635 4.9 68.4 1.0
CA A:MET1634 5.0 60.6 1.0

Chlorine binding site 2 out of 3 in 4ziq

Go back to Chlorine Binding Sites List in 4ziq
Chlorine binding site 2 out of 3 in the Crystal Structure of Trypsin Activated Alpha-2-Macroglobulin From Escherichia Coli.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Trypsin Activated Alpha-2-Macroglobulin From Escherichia Coli. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1703

b:87.6
occ:0.50
O A:GLU594 3.2 76.7 1.0
CA A:GLY597 3.7 68.5 1.0
N A:GLY597 3.7 70.0 1.0
CD2 A:LEU593 3.9 69.5 1.0
O A:SER595 4.0 81.6 1.0
O A:HOH1824 4.1 67.9 1.0
C A:SER595 4.2 79.9 1.0
OG A:SER1526 4.2 75.3 1.0
CB A:LEU593 4.3 64.6 1.0
C A:GLU594 4.4 76.6 1.0
C A:GLY596 4.5 74.1 1.0
CG A:LEU593 4.5 67.9 1.0
CA A:SER595 4.6 76.3 1.0
N A:GLY596 4.7 73.8 1.0
C A:GLY597 4.9 71.4 1.0
N A:SER595 5.0 75.1 1.0
CB A:SER1526 5.0 67.1 1.0

Chlorine binding site 3 out of 3 in 4ziq

Go back to Chlorine Binding Sites List in 4ziq
Chlorine binding site 3 out of 3 in the Crystal Structure of Trypsin Activated Alpha-2-Macroglobulin From Escherichia Coli.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Trypsin Activated Alpha-2-Macroglobulin From Escherichia Coli. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1704

b:84.3
occ:0.50
NH1 A:ARG1436 3.3 0.5 1.0
CD1 A:TYR1200 4.1 54.1 1.0
CE1 A:TYR1200 4.1 52.5 1.0
NH2 A:ARG1263 4.1 96.2 1.0
CG A:TYR1200 4.2 52.6 1.0
CZ A:TYR1200 4.2 56.5 1.0
OE1 A:GLU1398 4.3 0.0 1.0
CD2 A:TYR1200 4.3 51.5 1.0
CE2 A:TYR1200 4.4 50.4 1.0
CZ A:ARG1436 4.4 0.7 1.0
NH2 A:ARG1436 4.6 0.9 1.0
CD2 A:LEU1433 4.7 64.6 1.0
OH A:TYR1200 4.8 59.6 1.0
CD1 A:LEU1433 4.9 62.7 1.0
CB A:LEU1433 4.9 60.3 1.0
CD A:GLU1398 5.0 0.3 1.0
CB A:TYR1200 5.0 55.6 1.0

Reference:

I.Garcia-Ferrer, P.Arede, J.Gomez-Blanco, D.Luque, S.Duquerroy, J.R.Caston, T.Goulas, F.X.Gomis-Ruth. Structural and Functional Insights Into Escherichia Coli Alpha 2-Macroglobulin Endopeptidase Snap-Trap Inhibition. Proc.Natl.Acad.Sci.Usa V. 112 8290 2015.
ISSN: ESSN 1091-6490
PubMed: 26100869
DOI: 10.1073/PNAS.1506538112
Page generated: Fri Jul 26 04:39:09 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy