Chlorine in PDB 4znm: Crystal Structure of SGCC5 Protein From Streptomyces Globisporus (Apo Form)

Protein crystallography data

The structure of Crystal Structure of SGCC5 Protein From Streptomyces Globisporus (Apo Form), PDB code: 4znm was solved by K.Michalska, L.Bigelow, R.Jedrzejczak, G.Babnigg, J.Lohman, M.Ma, J.Rudolf, C.-Y.Chang, B.Shen, A.Joachimiak, Midwest Center For Structuralgenomics (Mcsg), Enzyme Discovery For Natural Product Biosynthesis(Natpro), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.74 / 2.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 99.596, 104.542, 108.465, 90.00, 90.00, 90.00
R / Rfree (%) 16.4 / 19.2

Other elements in 4znm:

The structure of Crystal Structure of SGCC5 Protein From Streptomyces Globisporus (Apo Form) also contains other interesting chemical elements:

Sodium (Na) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of SGCC5 Protein From Streptomyces Globisporus (Apo Form) (pdb code 4znm). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of SGCC5 Protein From Streptomyces Globisporus (Apo Form), PDB code: 4znm:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4znm

Go back to Chlorine Binding Sites List in 4znm
Chlorine binding site 1 out of 2 in the Crystal Structure of SGCC5 Protein From Streptomyces Globisporus (Apo Form)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of SGCC5 Protein From Streptomyces Globisporus (Apo Form) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl503

b:36.8
occ:1.00
O A:HOH610 3.1 41.5 1.0
N A:ALA159 3.2 18.0 1.0
O A:HOH750 3.5 19.3 1.0
CB A:ASP158 3.6 17.9 1.0
CE1 A:HIS154 3.6 26.8 1.0
CA A:ASP158 3.8 19.8 1.0
CB A:ALA159 3.9 21.5 1.0
CD1 A:ILE308 3.9 32.6 1.0
C A:ASP158 4.0 21.8 1.0
NE2 A:HIS154 4.1 28.7 1.0
CA A:ALA159 4.1 19.7 1.0
CD1 A:ILE45 4.2 32.0 1.0
CG2 A:ILE308 4.3 24.1 1.0
O A:HOH705 4.3 21.1 1.0
NE2 A:GLN369 4.8 60.6 1.0
ND1 A:HIS154 4.8 26.1 1.0
CG A:ASP158 4.9 20.2 1.0
CG1 A:ILE308 4.9 27.4 1.0

Chlorine binding site 2 out of 2 in 4znm

Go back to Chlorine Binding Sites List in 4znm
Chlorine binding site 2 out of 2 in the Crystal Structure of SGCC5 Protein From Streptomyces Globisporus (Apo Form)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of SGCC5 Protein From Streptomyces Globisporus (Apo Form) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl502

b:30.9
occ:1.00
N B:ALA159 3.2 18.6 1.0
O B:HOH778 3.4 22.7 1.0
CE1 B:HIS154 3.7 25.1 1.0
CB B:ASP158 3.7 20.4 1.0
CB B:ALA159 3.8 23.5 1.0
CA B:ASP158 3.9 18.2 1.0
C B:ASP158 4.0 18.7 1.0
CA B:ALA159 4.1 20.3 1.0
CD1 B:ILE308 4.1 25.1 1.0
NE2 B:HIS154 4.1 22.1 1.0
CD1 B:ILE45 4.2 35.5 1.0
CG2 B:ILE308 4.2 21.5 1.0
O B:HOH736 4.5 23.4 1.0
O B:HOH796 4.6 42.8 1.0
ND1 B:HIS154 4.8 26.8 1.0
CG1 B:ILE308 4.9 24.9 1.0
CG B:ASP158 4.9 24.0 1.0

Reference:

K.Michalska, L.Bigelow, R.Jedrzejczak, G.Babnigg, J.Lohman, M.Ma, J.Rudolf, C.-Y.Chang, B.Shen, A.Joachimiak, Midwest Center For Structural Genomics (Mcsg), Enzyme Discovery For Natural Product Biosynthesis (Natpro). Crystal Structure of SGCC5 Protein From Streptomyces Globisporus (Apo Form) To Be Published.
Page generated: Sat Dec 12 11:28:39 2020

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