Chlorine in PDB 4znr: Crystal Structure of DLN1 Complexed with Man(ALPHA1-3)Man

The structure of Crystal Structure of DLN1 Complexed with Man(ALPHA1-3)Man, PDB code: 4znr was solved by N.Jia, Y.L.Jiang, W.Cheng, H.W.Wang, C.Z.Zhou, Y.Chen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	34.57 / 2.10
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	57.166, 95.206, 146.112, 90.00, 90.00, 90.00
R / Rfree (%)	20.7 / 24.1

The binding sites of Chlorine atom in the Crystal Structure of DLN1 Complexed with Man(ALPHA1-3)Man (pdb code 4znr). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of DLN1 Complexed with Man(ALPHA1-3)Man, PDB code: 4znr:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Crystal Structure of DLN1 Complexed with Man(ALPHA1-3)Man


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of DLN1 Complexed with Man(ALPHA1-3)Man within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl403 b:32.9 occ:1.00 N A:GLY85 3.1 30.3 1.0 N A:GLY83 3.2 28.3 1.0 O A:HOH556 3.2 39.6 1.0 CA A:GLY85 3.5 29.4 1.0 CA A:GLY83 3.5 29.7 1.0 CA A:GLY81 3.6 23.0 1.0 C A:GLY83 3.7 30.4 1.0 N A:ALA84 3.7 32.0 1.0 N A:ASN82 3.8 25.0 1.0 C A:GLY81 3.9 23.8 1.0 O A:HOH503 4.1 26.8 1.0 OD1 A:ASN82 4.2 24.0 1.0 C A:ASN82 4.3 26.8 1.0 C A:ALA84 4.3 31.9 1.0 O A:GLY83 4.3 31.9 1.0 N A:GLY81 4.3 22.8 1.0 O A:HOH651 4.4 56.1 1.0 C A:GLY85 4.6 28.7 1.0 CA A:ASN82 4.6 24.8 1.0 CA A:ALA84 4.6 31.3 1.0 O A:GLY81 4.7 23.8 1.0 O A:HOH521 4.8 45.2 1.0 O A:ARG87 4.8 22.9 1.0 N A:THR86 4.9 27.5 1.0

Chlorine binding site 2 out of 2 in the Crystal Structure of DLN1 Complexed with Man(ALPHA1-3)Man


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of DLN1 Complexed with Man(ALPHA1-3)Man within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl403 b:30.7 occ:1.00 O B:HOH557 3.1 32.3 1.0 N B:GLY83 3.2 26.9 1.0 N B:GLY85 3.2 28.0 1.0 CA B:GLY85 3.5 26.9 1.0 CA B:GLY81 3.5 23.7 1.0 CA B:GLY83 3.6 28.5 1.0 N B:ASN82 3.7 24.5 1.0 C B:GLY83 3.7 29.1 1.0 C B:GLY81 3.8 24.8 1.0 O B:HOH556 3.9 21.6 1.0 N B:ALA84 4.0 29.2 1.0 O B:GLY83 4.1 29.2 1.0 OD1 B:ASN82 4.2 24.6 1.0 C B:ASN82 4.3 25.6 1.0 N B:GLY81 4.3 24.9 1.0 C B:ALA84 4.4 28.5 1.0 CA B:ASN82 4.6 24.8 1.0 O B:HOH623 4.6 31.6 1.0 C B:GLY85 4.6 26.3 1.0 O B:GLY81 4.7 23.7 1.0 CA B:ALA84 4.8 28.3 1.0 O B:ARG87 5.0 23.8 1.0 OH B:TYR114 5.0 33.2 1.0

N.Jia, N.Liu, W.Cheng, Y.L.Jiang, H.Sun, L.L.Chen, J.Peng, Y.Zhang, Y.H.Ding, Z.H.Zhang, X.Wang, G.Cai, J.Wang, M.Q.Dong, Z.Zhang, H.Wu, H.W.Wang, Y.Chen, C.Z.Zhou. Structural Basis For Receptor Recognition and Pore Formation of A Zebrafish Aerolysin-Like Protein. Embo Rep. V. 17 235 2016.
ISSN: ESSN 1469-3178
PubMed: 26711430
DOI: 10.15252/EMBR.201540851