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Chlorine in PDB 4zrl: Structure of the Non Canonical Poly(A) Polymerase Complex Gld-2 - Gld- 3

Enzymatic activity of Structure of the Non Canonical Poly(A) Polymerase Complex Gld-2 - Gld- 3

All present enzymatic activity of Structure of the Non Canonical Poly(A) Polymerase Complex Gld-2 - Gld- 3:
2.7.7.19;

Protein crystallography data

The structure of Structure of the Non Canonical Poly(A) Polymerase Complex Gld-2 - Gld- 3, PDB code: 4zrl was solved by K.Nakel, F.Bonneau, C.R.Eckmann, E.Conti, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.30 / 2.28
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 50.655, 89.367, 94.666, 90.00, 90.00, 90.00
R / Rfree (%) 18.7 / 23.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of the Non Canonical Poly(A) Polymerase Complex Gld-2 - Gld- 3 (pdb code 4zrl). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of the Non Canonical Poly(A) Polymerase Complex Gld-2 - Gld- 3, PDB code: 4zrl:

Chlorine binding site 1 out of 1 in 4zrl

Go back to Chlorine Binding Sites List in 4zrl
Chlorine binding site 1 out of 1 in the Structure of the Non Canonical Poly(A) Polymerase Complex Gld-2 - Gld- 3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of the Non Canonical Poly(A) Polymerase Complex Gld-2 - Gld- 3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1001

b:55.3
occ:1.00
NZ A:LYS701 3.2 35.1 1.0
ND2 A:ASN598 3.5 28.7 1.0
CG2 A:VAL723 3.6 27.4 1.0
CB A:SER595 3.7 25.4 1.0
CE A:LYS701 3.9 28.8 1.0
CA A:TYR720 4.0 27.8 1.0
O A:SER719 4.1 27.2 1.0
N A:TYR720 4.1 22.9 1.0
C A:SER719 4.2 25.1 1.0
CA A:SER595 4.2 36.9 1.0
CB A:SER719 4.5 23.8 1.0
CG A:ASN598 4.5 25.7 1.0
N A:SER595 4.5 22.7 1.0
CB A:VAL723 4.6 28.8 1.0
O A:HOH1138 4.6 36.8 1.0
OD1 A:ASN598 4.6 25.9 1.0
OG A:SER595 4.6 42.2 1.0
CB A:TYR720 4.6 26.5 1.0
CB A:PHE600 4.7 18.9 1.0
CD1 A:TYR720 4.8 30.0 1.0
O A:HOH1159 4.9 43.9 1.0
O A:PHE600 5.0 35.6 1.0
CA A:SER719 5.0 25.4 1.0

Reference:

K.Nakel, F.Bonneau, C.R.Eckmann, E.Conti. Structural Basis For the Activation of the C. Elegans Noncanonical Cytoplasmic Poly(A)-Polymerase Gld-2 By Gld-3. Proc.Natl.Acad.Sci.Usa V. 112 8614 2015.
ISSN: ESSN 1091-6490
PubMed: 26124149
DOI: 10.1073/PNAS.1504648112
Page generated: Sat Dec 12 11:28:50 2020

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