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Chlorine in PDB 5a4n: Crystal Structure of BPSL1147, A PC4 Homolog From Burkholderia Pseudomallei K96243 (Tetragonal Crystal Form)

Protein crystallography data

The structure of Crystal Structure of BPSL1147, A PC4 Homolog From Burkholderia Pseudomallei K96243 (Tetragonal Crystal Form), PDB code: 5a4n was solved by S.Werten, N.Bayer, W.Hinrichs, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 56.53 / 1.96
Space group P 43 2 2
Cell size a, b, c (Å), α, β, γ (°) 56.527, 56.527, 142.524, 90.00, 90.00, 90.00
R / Rfree (%) 21 / 25.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of BPSL1147, A PC4 Homolog From Burkholderia Pseudomallei K96243 (Tetragonal Crystal Form) (pdb code 5a4n). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of BPSL1147, A PC4 Homolog From Burkholderia Pseudomallei K96243 (Tetragonal Crystal Form), PDB code: 5a4n:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 5a4n

Go back to Chlorine Binding Sites List in 5a4n
Chlorine binding site 1 out of 4 in the Crystal Structure of BPSL1147, A PC4 Homolog From Burkholderia Pseudomallei K96243 (Tetragonal Crystal Form)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of BPSL1147, A PC4 Homolog From Burkholderia Pseudomallei K96243 (Tetragonal Crystal Form) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1074

b:45.5
occ:1.00
CD A:PRO58 3.3 35.4 1.0
N A:GLU59 3.4 31.9 1.0
CG A:GLU59 3.6 44.6 1.0
N A:PRO58 3.7 32.2 1.0
CB A:GLU59 3.8 39.9 1.0
CD A:ARG57 3.9 35.9 1.0
CB A:ARG57 3.9 31.9 1.0
CB A:PRO58 4.0 35.9 1.0
CG A:ARG57 4.0 34.1 1.0
NE A:ARG31 4.0 57.0 1.0
CG A:PRO58 4.0 36.5 1.0
CZ A:ARG31 4.1 62.5 1.0
CA A:GLU59 4.2 33.8 1.0
CA A:PRO58 4.2 32.7 1.0
C A:ARG57 4.2 28.5 1.0
C A:PRO58 4.2 31.2 1.0
CD A:ARG31 4.3 52.9 1.0
OE2 A:GLU59 4.3 52.1 1.0
CD A:GLU59 4.4 51.8 1.0
NH1 A:ARG31 4.4 60.7 1.0
NH2 A:ARG31 4.5 65.6 1.0
CA A:ARG57 4.6 29.2 1.0
NE A:ARG57 4.6 37.5 1.0
O A:ARG57 4.9 28.2 1.0

Chlorine binding site 2 out of 4 in 5a4n

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Chlorine binding site 2 out of 4 in the Crystal Structure of BPSL1147, A PC4 Homolog From Burkholderia Pseudomallei K96243 (Tetragonal Crystal Form)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of BPSL1147, A PC4 Homolog From Burkholderia Pseudomallei K96243 (Tetragonal Crystal Form) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1075

b:51.1
occ:1.00
O A:HOH2025 3.1 29.2 1.0
NH1 A:ARG57 3.2 39.1 1.0
CE2 A:TYR33 3.6 35.2 1.0
CE B:LYS15 3.8 55.0 1.0
CD A:ARG57 3.8 35.9 1.0
CG A:ARG57 4.0 34.1 1.0
CB A:ARG57 4.0 31.9 1.0
CZ A:ARG57 4.3 39.1 1.0
OH A:TYR33 4.4 40.5 1.0
CD2 A:TYR33 4.5 32.4 1.0
CZ A:TYR33 4.5 37.2 1.0
NE A:ARG57 4.5 37.5 1.0
NZ B:LYS15 4.6 54.9 1.0
CG B:LYS15 4.7 52.9 1.0
CD B:LYS15 4.7 52.9 1.0
N A:ARG57 4.8 27.2 1.0

Chlorine binding site 3 out of 4 in 5a4n

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Chlorine binding site 3 out of 4 in the Crystal Structure of BPSL1147, A PC4 Homolog From Burkholderia Pseudomallei K96243 (Tetragonal Crystal Form)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of BPSL1147, A PC4 Homolog From Burkholderia Pseudomallei K96243 (Tetragonal Crystal Form) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1074

b:50.0
occ:1.00
O B:HOH2017 3.1 59.8 1.0
N B:GLU59 3.3 33.2 1.0
CG B:GLU59 3.4 44.5 1.0
CB B:GLU59 3.5 40.2 1.0
CD B:PRO58 3.7 32.6 1.0
CD B:ARG57 3.7 42.5 1.0
N B:PRO58 3.8 30.2 1.0
CB B:ARG57 3.8 38.6 1.0
CG B:ARG57 3.9 40.2 1.0
CA B:GLU59 3.9 35.3 1.0
CD B:GLU59 4.0 50.8 1.0
OE1 B:GLU59 4.2 55.9 1.0
C B:PRO58 4.2 30.9 1.0
C B:ARG57 4.2 35.1 1.0
CB B:PRO58 4.3 34.1 1.0
CA B:PRO58 4.3 30.7 1.0
CG B:PRO58 4.4 34.3 1.0
NE B:ARG57 4.4 43.2 1.0
CA B:ARG57 4.6 36.7 1.0
OE2 B:GLU59 4.7 53.2 1.0
O B:ARG57 4.9 32.2 1.0

Chlorine binding site 4 out of 4 in 5a4n

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Chlorine binding site 4 out of 4 in the Crystal Structure of BPSL1147, A PC4 Homolog From Burkholderia Pseudomallei K96243 (Tetragonal Crystal Form)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of BPSL1147, A PC4 Homolog From Burkholderia Pseudomallei K96243 (Tetragonal Crystal Form) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1075

b:64.1
occ:1.00
NH1 B:ARG57 3.1 42.4 1.0
CG B:ARG57 3.3 40.2 1.0
N B:ARG57 3.4 35.1 1.0
NZ A:LYS15 3.4 49.0 1.0
CB B:ARG57 3.5 38.6 1.0
CG A:LYS15 3.7 41.9 1.0
CD B:ARG57 3.9 42.5 1.0
CE1 B:TYR33 4.0 54.9 1.0
CD1 B:LEU60 4.0 35.9 1.0
CA B:ARG57 4.0 36.7 1.0
CZ B:ARG57 4.2 42.9 1.0
CE A:LYS15 4.3 45.1 1.0
CD A:LYS15 4.4 44.2 1.0
C B:ILE56 4.4 34.1 1.0
NE B:ARG57 4.5 43.2 1.0
CD1 B:TYR33 4.5 50.5 1.0
O B:SER55 4.6 39.2 1.0
CA B:ILE56 4.7 35.3 1.0
CB A:LYS15 4.8 41.0 1.0

Reference:

S.Werten, C.Kohler, N.Bayer, I.Steinmetz, W.Hinrichs. Structural Analysis and Knock-Out of A Burkholderia Pseudomallei Homolog of the Eukaryotic Transcription Coactivator PC4. Gene V. 557 140 2016.
ISSN: ISSN 0378-1119
PubMed: 26625975
DOI: 10.1016/J.GENE.2015.11.037
Page generated: Sat Dec 12 11:29:38 2020

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