Atomistry » Chlorine » PDB 4zyf-5aa2 » 5a8p
Atomistry »
  Chlorine »
    PDB 4zyf-5aa2 »
      5a8p »

Chlorine in PDB 5a8p: Crystal Structure Beta-Glucanase SDGLUC5_26A From Saccharophagus Degradans in Complex with Tetrasaccharide B

Enzymatic activity of Crystal Structure Beta-Glucanase SDGLUC5_26A From Saccharophagus Degradans in Complex with Tetrasaccharide B

All present enzymatic activity of Crystal Structure Beta-Glucanase SDGLUC5_26A From Saccharophagus Degradans in Complex with Tetrasaccharide B:
3.2.1.73;

Protein crystallography data

The structure of Crystal Structure Beta-Glucanase SDGLUC5_26A From Saccharophagus Degradans in Complex with Tetrasaccharide B, PDB code: 5a8p was solved by G.Sulzenbacher, M.Lafond, T.Freyd, B.Henrissat, R.M.Coutinho, J.G.Berrin, M.L.Garron, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.70 / 2.20
Space group P 41 3 2
Cell size a, b, c (Å), α, β, γ (°) 144.382, 144.382, 144.382, 90.00, 90.00, 90.00
R / Rfree (%) 15.2 / 19

Other elements in 5a8p:

The structure of Crystal Structure Beta-Glucanase SDGLUC5_26A From Saccharophagus Degradans in Complex with Tetrasaccharide B also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure Beta-Glucanase SDGLUC5_26A From Saccharophagus Degradans in Complex with Tetrasaccharide B (pdb code 5a8p). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure Beta-Glucanase SDGLUC5_26A From Saccharophagus Degradans in Complex with Tetrasaccharide B, PDB code: 5a8p:

Chlorine binding site 1 out of 1 in 5a8p

Go back to Chlorine Binding Sites List in 5a8p
Chlorine binding site 1 out of 1 in the Crystal Structure Beta-Glucanase SDGLUC5_26A From Saccharophagus Degradans in Complex with Tetrasaccharide B


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure Beta-Glucanase SDGLUC5_26A From Saccharophagus Degradans in Complex with Tetrasaccharide B within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1369

b:21.4
occ:1.00
 O A:HOH2163 3.1 25.7 1.0
N A:ASN231 3.2 17.9 1.0
NE A:ARG200 3.2 21.5 1.0
O A:HOH2173 3.3 39.6 1.0
N A:THR192 3.3 18.5 1.0
CA A:THR191 3.6 17.1 1.0
OG1 A:THR191 3.7 14.7 1.0
CB A:PHE230 3.7 19.8 1.0
CA A:ASN231 3.8 19.7 1.0
OG1 A:THR192 3.9 17.9 1.0
NH2 A:ARG200 3.9 23.8 1.0
C A:THR191 4.0 17.6 1.0
CZ A:ARG200 4.0 21.8 1.0
CD A:ARG200 4.1 22.2 1.0
CB A:THR191 4.1 16.0 1.0
C A:PHE230 4.3 18.2 1.0
CA A:PHE230 4.4 18.0 1.0
CA A:THR192 4.4 17.9 1.0
CG A:PHE230 4.5 20.8 1.0
CB A:THR192 4.6 18.3 1.0
CB A:ASN231 4.6 21.6 1.0
N A:MET193 4.7 18.4 1.0
O A:PRO190 4.7 18.5 1.0
N A:THR191 4.7 16.6 1.0
CG2 A:THR192 4.7 19.4 1.0
CB A:ARG200 4.8 20.5 1.0
CD1 A:PHE230 4.9 21.2 1.0
C A:THR192 5.0 16.9 1.0

Reference:

M.Lafond, G.Sulzenbacher, T.Freyd, B.Henrissat, J.G.Berrin, M.L.Garron. The Quaternary Structure of A Glycoside Hydrolase Dictates Specificity Towards Beta-Glucans J.Biol.Chem. V. 291 7183 2016.
ISSN: ISSN 0021-9258
PubMed: 26755730
DOI: 10.1074/JBC.M115.695999
Page generated: Fri Jul 26 05:01:18 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy