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Chlorine in PDB 5abx: Complex of C. Elegans EIF4E-3 with the 4E-Binding Protein Mextli and Cap Analog

Protein crystallography data

The structure of Complex of C. Elegans EIF4E-3 with the 4E-Binding Protein Mextli and Cap Analog, PDB code: 5abx was solved by D.Peter, O.Weichenrieder, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.282 / 1.66
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 71.040, 71.040, 85.280, 90.00, 90.00, 90.00
R / Rfree (%) 17.33 / 19.38

Other elements in 5abx:

The structure of Complex of C. Elegans EIF4E-3 with the 4E-Binding Protein Mextli and Cap Analog also contains other interesting chemical elements:

Zinc (Zn) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Complex of C. Elegans EIF4E-3 with the 4E-Binding Protein Mextli and Cap Analog (pdb code 5abx). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Complex of C. Elegans EIF4E-3 with the 4E-Binding Protein Mextli and Cap Analog, PDB code: 5abx:

Chlorine binding site 1 out of 1 in 5abx

Go back to Chlorine Binding Sites List in 5abx
Chlorine binding site 1 out of 1 in the Complex of C. Elegans EIF4E-3 with the 4E-Binding Protein Mextli and Cap Analog


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Complex of C. Elegans EIF4E-3 with the 4E-Binding Protein Mextli and Cap Analog within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1219

b:26.9
occ:0.69
ZN A:ZN1217 2.3 25.8 0.7
HA A:HIS126 3.0 25.7 1.0
HD21 A:LEU129 3.0 28.2 1.0
HG2 A:GLU130 3.1 27.3 1.0
HB3 A:LEU129 3.2 21.0 1.0
OE2 A:GLU130 3.2 30.9 1.0
O A:HOH2076 3.6 31.8 1.0
HH21 B:ARG475 3.6 40.6 1.0
ND1 A:HIS126 3.7 25.1 1.0
CD A:GLU130 3.8 25.2 1.0
CG A:GLU130 3.9 22.8 1.0
CA A:HIS126 3.9 21.4 1.0
CD2 A:LEU129 3.9 23.5 1.0
HB2 A:HIS126 3.9 27.1 1.0
HG A:LEU129 3.9 25.0 1.0
O A:HIS126 3.9 20.2 1.0
CB A:LEU129 4.1 17.5 1.0
H A:GLU130 4.1 22.9 1.0
HE3 A:MET133 4.1 26.6 1.0
CG A:LEU129 4.2 20.8 1.0
CB A:HIS126 4.2 22.6 1.0
HG3 A:GLU130 4.3 27.3 1.0
CG A:HIS126 4.3 23.8 1.0
NH2 B:ARG475 4.4 33.8 1.0
C A:HIS126 4.4 22.4 1.0
HD22 A:LEU129 4.4 28.2 1.0
N A:GLU130 4.4 19.1 1.0
HE2 A:MET133 4.4 26.6 1.0
HD23 A:LEU129 4.5 28.2 1.0
HH22 B:ARG475 4.5 40.6 1.0
HB2 A:LEU129 4.6 21.0 1.0
CE1 A:HIS126 4.6 21.8 1.0
CE A:MET133 4.7 22.2 1.0
OE1 A:GLU130 4.7 22.1 1.0
O A:ASP125 4.8 21.6 1.0
HE1 A:HIS126 4.8 26.2 1.0
HA A:GLU130 4.9 21.3 1.0
O A:HOH2074 4.9 33.7 1.0
C A:LEU129 4.9 19.9 1.0
N A:HIS126 4.9 20.7 1.0

Reference:

D.Peter, R.Weber, C.Koene, M.-Y.Chung, L.Ebertsch, V.Truffault, O.Weichenrieder, C.Igreja, E.Izaurralde. Mextli Proteins Use Both Canonical Bipartite and Novel Tripartite Binding Modes to Form EIF4E Complexes That Display Differential Sensitivity to 4E-Bp Regulation Genes Dev. V. 29 1835 2015.
ISSN: ISSN 0890-9369
PubMed: 26294658
DOI: 10.1101/GAD.269068.115
Page generated: Sat Dec 12 11:30:08 2020

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